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The Wayback Machine - https://web.archive.org/web/20210211002546/https://github.com/topics/hiv
Here are
47 public repositories
matching this topic...
Source files for building the IDM EMOD disease transmission model.
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
FAVITES (FrAmework for VIral Transmission and Evolution Simulation)
Updated
Nov 8, 2020
Python
Network Models of HIV Transmission Dynamics among MSM and Heterosexuals
Point of care system for AMPATH clinics
Updated
Feb 10, 2021
TypeScript
Current development version of EvoNetHIV package
a platform for the collection, storage, retrieval, and analysis of experimental data for laboratory workflows
Incidence Estimation Tools
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
Updated
Oct 12, 2020
HTML
RocaSec: A standalone GUI-based package for robust co-evolutionary analysis of proteins
Reconstruction and analysis of the HIV outbreak in Scott County, Indiana
Software for identifying co-evolutionary sectors in proteins using RoCA
Updated
Sep 27, 2018
MATLAB
A toolkit for creating databases of viral integration sites in host genomes
Updated
May 30, 2018
Perl
Estimating the contribution of each step of the HIV cascade to new infections
(P.I. Max Essex) Botswana Combination Prevention Project
Updated
May 3, 2020
Python
Software for inferring the intrinsic fitness landscape of poliovirus capsid protein (vp1) and comparing it with that of analogous proteins in HIV
Updated
Dec 18, 2019
MATLAB
Tutorial materials as referenced in IDM's documentation for EMOD, an agent-based disease dynamics model.
Updated
Nov 24, 2020
Python
Prediction of HIV-associated neurocognitive disorder (HAND) status from HIV quasispecies features
Updated
Jan 29, 2018
HTML
WPI Bioinformatics/Computational Major Qualifying Project 2019-2020
Updated
Sep 29, 2020
Rich Text Format
Research compendium for Spatial analysis of TB notifications in Blantyre, Malawi
Updated
Sep 21, 2018
HTML
Understanding suppression of HIV in R
Functions and scripts used in a pipeline to find novel drug resistance associated mutations in HIV pol-RT
Updated
Oct 8, 2020
Python
Lista di centri dove poter testare IST e HIV, chiedere informazioni e aiuto.
Updated
Jan 30, 2021
JavaScript
Impact of providing ART to PLHIV who are ineligible for Medicare in Australia
Look at flows of where infections come from and go to, cross-referencing EMOD log files
Updated
Sep 15, 2017
HTML
R package for cleaning MSF programmatic HIV data:
Super LeArner Predictions using NAb Panels
A simple, open source Sample Management System for Viral Load, EID and Covid-19 testing.
Updated
Apr 22, 2020
Shell
Australian diagnosis and care cascade calculations
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