Dosage Sensitivity Curation
The Dosage Sensitivity Curation task team uses a systematic process by which to evaluate the evidence supporting or refuting the dosage sensitivity of individual genes and genomic regions. This information can ultimately be used to inform future cytogenomic microarray designs and clinical interpretation decisions.
What is the process?
We have outlined the framework for such a process in a 2012 Clinical Genetics article (PMID: 22097934).
How can I access the Dosage Sensitivity Map?
All of our reviews are publically available online - view the information we have compiled on completed genes, track our progress, request that a gene be evaluated, or ask us questions through the Dosage Sensitivity Map site. The information can also be downloaded in bulk via FTP, and files are updated daily.
ClinGen Dosage Sensitivity Map
FTP site for Dosage Sensitivity Map data
How can I help?
Evaluating all the genes in the genome is a monumental task, and we need your help! If you are interested in becoming involved with this committee, please contact us at clingen@clinicalgenome.org.
Chairs
Coordinators
Subgroups
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General Gene Dosage Sensitivity Subgroup
This subgroup evaluates genes and/or non-recurrent genomic regions for evidence for haploinsufficiency and triplosensitivity.
About this group -
Recurrent CNVs Dosage Sensitivity Subgroup
This subgroup provides curation for recurrent and non-recurrent (variable breakpoint) genomic regions associated with constitutional conditions.
About this group -
Hereditary Cancer Dosage Sensitivity Subgroup
This subgroup curates constitutional dosage sensitivity of genes associated with an increased risk for cancer or tumors.
About this group
Documents
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Utilizing ClinGen gene-disease validity and dosage sensitivity curations to inform variant classificationPublications - October 25, 2021
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Dosage Standard Operating Procedure- Data EntryCuration Activity Procedures - June 2, 2021
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Dosage Standard Operating Procedure- Scoring GuideCuration Activity Procedures - May 3, 2021
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Towards an evidence‐based process for the clinical interpretation of copy number variationPublications - November 19, 2011
Tools & Resources
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Dosage Sensitivity Tools
The ClinGen Dosage Sensitivity tools aid the curation process that collects evidence supporting/refuting the haploinsufficiency and triplosensitivity of genes and genomic regions. The interface is currently restricted to Dosage Sensitivity curators.
Curations
Working Group Membership
Membership spans many fields, including genetics, medical, academia, and industry.
Erica Andersen PhD, FACMG
Erin Riggs, MS, CGC
Elizabeth Gavrilov BA
Monica Araujo MSc
Yang Cao PhD, FACMG
Laura Conlin PhD, FACMG
Caitlin Cooney CGC
Noah Dillon PhD
Adele Fairclough BSc
Patricia Fernandez Ferri PhD, FACMG
Meagan Gloven-Brown BSc, MHS
Ben Hilton, PhD, FACMG
Nicole Hoppman, PhD, FACMG
SIBEL KANTARCI, MSc, MBA, PhD, FACMG
Chimene Kesserwan MD, FACMG
Prasad Kopparapu PhD
Angela Lager PhD, FACMG
Kelly Laughlin, MS
Zoe Lewis MS, CGC
Lili Li MD, PhD
Michelle Mah MSc, MLT
Bailey Mallon MS, CGC
Christa Martin PhD, FACMG
Moses Mathenge BSc, MSc
Abbie Padeganeh PhD, FACMG, CGMB, CCG
Lauren Pearo BSc (Hons)
Justin Pennypacker, MS, MB(ASCP)CM
Lindsey Power, PhD
Kristen Rasmussen CGC
Cassandra Runke CGC
Laura Sack PhD, FACMG
Scott C. Smith PhD, FACMG
Fariborz Soheili PhD
Meng Su PhD, FACMG
Andrea Vaags PhD, FCCMG
Diogo Ventura Lovato BSc, PhD
Wei Wang PhD, FACMG
Jian Zhao PhD, FACMG