sgafan33

Links validated Feb 2012.

Giant McShep AU fic list by Sheppard's job (A thru K) by elderwitty

Giant McShep AU fic list by Sheppard's job (L thru Z) by elderwitty

Giant McShep AU list on one page

Alternate Universe recs by ratcreature. List not designated McShep.


McShep AU

SG-15 by danvers (dvs). The adventures of SG15, starring Col. Dave Dixon, Martouf, Sheppard and McKay.</a>

Animal Husbandry by casspeach. Rodney is a veterinary doctor treating John's horse.

The Atlantis Project by seperis. Rodney has the plans for an new energy source. John is hunting him down. Incomplete.

Beginnings, Believe, and Learning by Neo_Star0114. Detective John Sheppard encounters Sorcerer Rodney McKay.

The Blade by kellerfic. Rodney's father gifts him with a new slave, John.

But Wait, There's More by lavvyan. Rodney is an inventor and John is a telemarketing host.

Converging by purna. John's a lifeguard who saves a man with a secret. But secrets don't stop him from falling in love with Rodney McKay.

Crimes Against Humanity by seperis. WIP. What if they used their powers for evil, instead of good?

Deconstructing Rodney by cats_bum. A graphic take on what happened after The Storm. AU WIP not updated since Oct 2006.

Fading Skies by Diamond Raven. After John is badly wounded while serving in Somalia, he and Rodney have to learn how to make a serious physical disability a part of their lives.

Five Ways John and Rodney Meet by danvers. 1. John and Rodney are two members of Col. Dave Dixon's SG15 team. 2. Rodney is on the run and takes refuge in John's beachside house. 3. John is an FBI agent protect concert pianist Rodney (guest appearances by Mulder and Scully). 4. Rodney is a Ghostbuster with Carter and Markov and John is a new client. 5. Rodney is robbed in Peru and John is a pilot flying him out.

Four Quarters by trinityofone. John, Rodney, Teyla and Ronon make up The Puddlejumpers, a rock and roll band. The Best of The Puddlejumpers. A music mix download.

Entangled Particles by zinfic John is stuck in Antarctica when he picks up a book by the award winning author, Dr. Rodney McKay. It was human relationships explained as physics, and it was a beautiful, brilliant, genius piece of work. More fics in this AU by zinfic's beta, the_cephalopod.

Entity by danvers. Atlantis and SG1 meets Ghostbusters AU. Rodney McKay, Samantha Carter and Svetlana Markov are scientists on the cusp of a breakthrough involving mysterious entities. John Sheppard turns up on their doorstep asking for help.

Fireball by celli. John is a race car driver and Rodney is the mechanic for Weir Racing.

Ghost Writer by lavyan. John writes romance novels and Rodney is a ghost.

The History of Atlantis, Part II by mirabile_dictu. An Atlantis that didn't make contact with Earth.

Imperfections by Dasha. Rodney is a Sentinel and he just hired a new guide named John Sheppard. Rodney and John also appear in Unexpected Places and Other Strange Roads, a Sentinel crossover AU with Benson, Bones, Diagnosis Murder, Numb3rs, Psych, and Quantum Leap. It's the kidnapped Sentinels story. Dasha's fan fiction is here.

Incorporating A Few Slight Adjustments by lavvyan. After Rod's visit to an alternate universe, he wonders what it would take to get to know his own team.

It's All Your Fault Radek, You Meddling Bastard by fawkesielady_ed. After leaving the military, John finds work assisting veterinarian Rodney McKay in Deep Cove, Canada.

John Sheppard's Guide to Surviving Project Runway by sheafrothedon. The Atlantis team as fashion designers.

Junk Cheap by devildoll. Rodney is a college professor who lives in an apartment building where John runs a junk shop on the ground floor.

No Refunds or Exchanges by astolat. It shouldn't have been that hard to get good help. Rodney makes an order over the internet and John shows up. On AO3. On astrolat's website.

Out Of Bounds by Icarus. The ice skating fic. Can John win ice skating Olympic gold with Rodney as his coach?

The Proposition by jane_elliot. John owns a catering business and Rodney is his rich client. Carson, Laura, Ronon, Teyla, Aiden and Miko are John's adopted brothers and sisters.

A Regency Tale by GraceandFire. John Sheppard is determined to bring to ruin the villainous McKay family. But young (ok, youngish) Rodney interferes with his plans. A Harlequin Romance.

The Return of the Dragons by Mithreon. Rodney is a gray magician, creator of Atlantis, the city in the clouds.

Romance at the Roadkill Grill by lamardeuse. Rodney's an award winning TV chef, John's a Maine fisherman.

Sunny, California by Mystic. Can a professional surfer and a veterinarian find anything in common other than a cat?

Stairway to Heaven. Sex, drugs and rock 'n roll at 69 Atlantis St. University AU.

Teamwork by Magus Minor. John's a mathematician, Rodney's a Mountie. Together with Beckett and Cadman, they're Team Misfit on Atlantis.

Tree Hugger by lavvyan. John's a lumberjack and Rodney's an appointed Dryad.

The Twenty Year Thaw by denynothing1. Rodney and John were both ski champions when they were young and briefly something more to each other. Now, 20 years later John shows up at the ski resort where Rodney has been designing world class ski runs. On A03.

Wide Open Ocean. John is a marine technician and Rodney's the new vet at Chicago's Shedd Aquarium.

McShep slash

Original Atlantis

Aegis Entrall by Springwolf & Leah and Stricken by Squeaky and Leah. A series of Big Bang stories. The ATA gene didn't just confer the power to activate their technology. For ten percent of Earth's population, like John Sheppard, the ATA gene also gave them Gifts: special abilities that made them admired, envied, and feared. John is a Charmer, Elizabeth an Empath, Beckett can see the structure of DNA. And McKay's Gift, with the help of Beckett's gene therapy, is unique.

Advanced Ground Fighting Techniques by xanphibian. The more Rodney trains with Teyla and Ronon, the more John moves away from the team.

Benched by Speranza. "I've learned so much from you." Rodney's self sacrifice isn't sitting well with John.

A Better Fate by chelle. John goes home to visit his parents and Rodney goes with him. My favorite John/Rodney relationship story.

But Never The Nights by lavvyan. When Rodney is culled, John suddenly has to deal with the loss of his best friend. 144 days and one night.

Cages by joolz. John and Rodney are taken captive and are used to feed a Wraith in the next cell.

Can't Have One Without the Other by shalott. Skiiing and hot tubs.

Charting the Motion of Planets by Dasha. Rodney is captured by the Genii and doesn't think he can resist being tortured. A bowl of fruit presents a possible solution.

Cliches Work Best by Elfkin. McKay pov. John and Rodney are injured and wait for rescue.

DADT, Damyata, Dayadhvam by trinityofone. Don't Ask, Don't Tell is controlled by a chip.

Ed the Cat by nakedwesley. Rodney's relationship with his cat and John.

Face Value by minnow1212. Rodney is suddenly telepathic.

Freedom's Just Another Word For Nothing Left To Lose by Synecdochic. Future fic. SGC finally stops calling him by December. Rodney celebrates by writing a final exam for his relativity class so difficult that it reduces four students to tears in the exam hall. Upon reflection, he decides to be merciful and offer partial credit.

Friendly by speranza. John discovers Rodney is keeping a secret.

The Geeks and Goons Guides by likethekoschka. Series of stories alternating between John's and Rodney's point of view. John and Rodney are an established couple.

General and Dr. Sheppard by Xanthe. Alternate universe versions of Sheppard and McKay are transported to Atlantis. The AU versions of John and Rodney come from a society of dominants and submissives and have a hard time fitting in. Coming Home. How the AU Sheppard and McKay met and got together in the d/s universe. Hiding In Plain Sight. NCIS comes to the d/s Atlantis to help solve a series of murders. AU of the AU: The Spaces Inside by lavvyan.

In the City of Seven Walls by auburn. The team is abushed. Ronon is left for dead, Teyla is sold to one slave owner and John and Rodney to another. The edited version.

Indelible by shaenie. Who knew there was more than one control chair in Atlantis?

Liberty by yin_again and ladycat777. John and Rodney get a little tropical vacation courtesy of Lorne Greene (Buffy, not Bonanza).

A Little Bit of Faith by Mystic. No one took Rodney seriously when he complained about his hypogycemia.

Lost in Waiting by Lacey McBain. A character study of why John doesn't like to be touched.

Loving Rodney by Lady Ra. Atlantis loves Rodney. The one that goes -

Radek gestured toward the equipment that Rodney was working on. "We have chemists, geneticists, microbiologists, astrophysicists," here Rodney waved his hand as if Radek had been taking attendance then went back to his wiring, "meteorologists, even botanists."

"And?" John prompted him.

"What we need," Rodney took up, "are plumbers, electricians, mechanics, mechanical engineers, and heavy and civil construction engineers."

No Refunds or Exchanges by astolat. Rodney forgot to specify gender and John arrives in Atlantis as his mail order bride.

Oasis by Rebecca. John and Rodney try to hide their relationship, but eventually they out themselves after one too many returns from the dead. Takes place after McKay and Mrs. Miller.

Ordinary Life by shalott and speranza. Rodney takes a consulting job for Raytheon and John goes along as his mathematician.

The Origin of All Things by iloveatlantis. Something goes wrong during the evacuation of Atlantis, stranding members of the Atlantis expedition and SG1 on a very strange world. McKay/Sheppard, Zelenka/Jackson. WIP

Pegasus Purgatorio By MrsHamill. Sheppard and McKay are stranded in Pegasus after the evacuation and destruction of Atlantis. They decide to rescue whoever is left and kill the Replicators and Wraith. Heart of Gold fic. Also at MrsHamill's site.

Referencing Gilbert Ryle by Brighid. John and Rodney receive the consciousnesses of two men who were lovers and who were left behind by a civilization to share their knowledge.

Sentience by Tarlan. Upon arriving on Atlantis, only the gene carriers and their lovers are allowed to stay. Series.

A Slightly Different Quality of Light by glitterati. John's memories are downloaded into Atlantis and Rodney is in charge of separating John from Atlantis.

The Slow Braille of Touch by beadtific. John notices a personal habit of Rodney’s and begins watching him more closely.

The Slow Slide of Indifference by ladyholder. When Earth starts to lose interest in Atlantis, the expedition decides to secede. Expedition members include a newly arrived Clone!O'Neill and Clone!Jackson.

A Taste of Apples by Auburn. Infected by spores, the Atlantis team becomes telepathic with one another.

Things To Do In Denver When You're Dead by Speranza. What happens when Elizabeth, John, Rodney and Carson return to Earth after the first year on Atlantis. Some concerts and a Broncos game.

Three Minutes til Midnight by Rebecca. Ficlet. John wonders of what Rodney dreams.

Tidings of Comfort and Joy by tiranog. Off planet searching for a ZedPM, Rodney must instead rescue his teammates confronting their worse fears in virtual reality.

The Touch by sp3. All he'd wanted was to be warm again until Rodney touched him.

Transcendental by shalott (astrolat). Rodney takes over running Atlantis after Elizabeth is poisoned by nerve gas by the Genii.

Under The Skin by danvers. John, Rodney and a pen.

Visiting Hours by lilysaid. John is held captive in a mountain.


McShep. It's just...

Abilene by nilahasi. Bank robbers.

Meltdown by thegrrrl. It's hot.

Wireless by miso-no-tsuki. John/Rodney, Carson/Radek. Phone sex, Atlantis style.

Slash

Episodic

Multi season 1
A Little Bit of Faith by Mystic. Why doesn't anyone believe Rodney when he says he's hypoglycemic?

The Storm
The Lull by gaffer42. The knife was poisoned.

Trinity
Shadowland by misty4me. Rodney/Carson. In the aftermath of Doranda, only Carson understands.

An Exceptional Cup of Coffee by Sandy. Something had to be done to repair this damaged friendship, and since the two men involved were too childish to get past their hurt feelings, it looked like it was up to Radek to fix the problem.

Shock by Frostfire. John orders Rodney to eat on an off-world mission and Rodney suffers from an allergic reation.

Resilience by Tira Nog. John discovers Rodney's feelings for him are more than just friendship. But can they survive Doranda? The fic with the recreation hall piano, surfboards.

List of post Trinity fics complied by ibnf.


Conversion
Before & After by helena_eternal. "Governments will push and push, but there are times when The People push back. Zelenka's POV." John still has the visible signs of the Iratus bug. The US is declassifying Atlantis and they don't want a blue military commander.

The Rodney Multiplex by nessalynna. After recovering from being a bug, John is able to see everyone's thoughts. Rodney's thoughts take up whole rooms.


Grace Under Pressure
Hail Mary by Joolz. John confronts a group of Marines who want to know why people keep dying around McKay. Tiny bit of pre-slash.

How To Decompress by 30toseoul. John/Rodney/Radek. Rodney needs to warm up. Author has moved to DW and fics are friends-locked,


Team
Fallout by sian1359. Ronon's POV. Takes place after Epiphany. Part 2.

Everybody Loves Rodney by rasah. When John, Teyla and Ronon commisserate with each other over their love of Rodney, Rodney is feeling left out.


Rodney/Carson
Breaking the Rules by Xanthe. Rodney misses his cat and Carson has a remedy for that. Checked 9-21-2017.

Moments Sacred and Profane by mice. Series of 24 stories of Rodney and Carson's journey together. Stories written 2004 thru 2006 and follows season 1 and 2. No ending, the stories just stop. Checked 9-21-2017.

Sympathy for Eve by sgatlantislight. Rodney/Carson. An Ancient device turns McKay into a woman. Rodney and Carson experiment and the consequences follow. Checked 9-21-2017.

Touch by chaps1870. Newbies to Atlantis take advantage of Rodney's claustrophobia. Checked 9-21-2017.

Turnabout by E. Batagur. Rodney is turned into a woman by a Wraith beam.

Unspoken by chaps1870. John finds out Rodney and Carson are in a relationship and it threatens his friendship with Rodney. Rodney is tested by the Kinoban. Checked 9-21-2017.


Rodney/Radek
Touch of a Lonely City by Taylor Dancinghands. Radek must figure out how to save Rodney from nanocites that threaten Rodney's sanity.


Aliens made them do it
Pier Glass Reflection by Rachel Sabotini. For once, the barely mentioned aliens are actually nice.


Mpreg or Kids
A Beautiful Lifetime Event by astrolat. John and Rodney have an accident with an Ancient device and find themselves parents of little Hypatia.

The Circle by mz_bstone. Follow up to A Beautiful Lifetime Event. Unavailable, LJ is locked.

A Farm in Iowa by sheafrotherdon. John inherits a farm, Rodney ends up entirely out of his element, and there is much ado about baseball.

Miracles by Master Elayna. Ancient tech and unexpected sex with John leaves Rodney pregnant with twins. One chapter of the series has John, more Ancient tech and wings.

The Neighborly Detective and the Tragic Woobie Widower by Master Elayna. Also at Wraithbait. John, a police detective, moves next door to widowed astrophysicst Dr. Rodney McKay and his son Timothy.

On Life and Living by WesleysGirl. John misses his wife, Elizabeth. Being a single parent to their daughter Kayla is not how John intended his life to go. But then McKay came into their lives.

Raising Madison by mrshamill. Rodney has to raise his niece after an accident kills his sister and her husband.

Small Primes and Square Roots by Livia. Rodney is a single parent to his dead sister's child, Sara, when suddenly John Sheppard walks into their lives.



Transformations or Not Quite Human

Animal AU list by debris-k
Animal Tranformation list by debris-k
Penguin fic list by thirdblindmouse


Animalia Sequence by Leah. Part of the Pegasus B universe. Where Daniel becomes a tarsier and John and Rodney become penguins. Jack has to ride herd over all of them.

Of Pigs and Men by girlgonemadd. Lessons learned when John is transformed into a piglet. It's the ice rink story.

Rodney McKay: Cat Lady of Atlantis by mklutz. Two fics. Rodney with Team Cat. Rod as a cat.

Checkmate 'verse by beadattitude. John's spirit animal is a black cat.

Foreign Territory by Macx and Lara Bee. First in the Borderlines AU. An Ancient machine turns John into a horse like creature with 2 horns. He eventually becomes human again, but a telepathic link between John and Rodney remains.

In Shades of Indigo and Violet by out_there. Rodney has wings.

Free To A Good Home by mardahin. John has wings. As a plush Pegasus.

Rise and Fall by trinityofone. More wingfic. All John ever wanted to do is fly.

An Aesthetic Solitary Thing by eliade. Rodney is an alien. Ok, just half alien.

Ardhanarishvara by Auburn & Mona aka auburnnotlisa. "Tell me, Colonel, did you take a look around and think, hey, it's the Planet of Sex Changes?" WIP

Contraflow by Lobelia. Duet from Cadman's POV.

What Happens in the Clubhouse by Skoosiepants. John, Rodney, Ronon, and Larry from biology are transformed into children.

And Hope by Sihaya Black. John finds a device that has held Rodney a prisoner for over 5 thousand years.

Genus by mklutz. John buys a bottle at a farmer's market and finds a genie named Rodney within. Unfinished fic, last updated Jan 2007.

Through the Noise to the Sea by sardonicsmiley. When John falls through the balcony railing into the Atlantean sea, he's rescued by a merman named Meredydd.

A Clear and Different Light by friendshipper and naye. Rodney McKay, raised by a pod of telepathic whales. John Sheppard, mage with fae blood. Teyla Emmagan, rune-scientist. Ronon Dex, winged soldier. On the waystation of Atlantis, they're about to become embroiled in an age-old war against a brutal enemy. An SGA Big Bang story. Checked 09-21-2017.

Mightier Still by Meansgirl. An active ATA gene means that the carrier has access to superpowers. John Sheppard happens to have the gene, and along with a smart aleck sidekick, a doctor, two scientists, and a mysterious commune of super-powered do-gooders, he must face off against an enemy intent on using their powers for evil.


Moresomes

Upward, Not Northward by amitree. John/Rodney/Elizabeth. With things to say, John Sheppard goes west for Christmas.

In the Name of Love by chaps1870. John/Rodney/Carson. It's just...

Alone In Your Mind by James at Gila's Cave. John/Rodney/Carson. Carson's encounter with Ancient tech makes him the new Atlantean maintenance man.

Yule by James at Gila's Cave. John/Rodney/Carson. A trapped Carson makes some confessions.

Lessons Learnt by vanwaelda. John/Rodney/Carson. John decides a little punishment is in order when he comes home from a mission to find Rodney in bed with Carson.

Yoshino by eretria. John/Rodney/Sam. "It was a moment set aside from the rest of their lives".

Equilibrium by alyse. John/Rodney/Teyla. Only males are can negotiate with the Olem, and since Teyla is the best at bargaining, she comes back with something that can be used outside of the bargaining tent.

Rave Atlantis by smitty. John/Rodney/Cadman. What goes on in the Room, stays in the Room. With musical download.

3 Lovers by speranza. Teyla and her relationships with John. Rodney and Ronon.

Gifts Unasked For by tigerlady. John/Rodney/Teyla. The team goes after Ford when he's taken by the Wraith.

Multi-fandom list of crossover fics by ratcreature. Search for Atlantis.


Crossover with SG1

The Connection by Keikokin. AU. General Jack O'Neill is John Sheppard's father.

Crusade in Jeans by Mystic. Jack O'Neill, John Sheppard and Rodney McKay are transformed into children.

Gypsies, Tramps and Thieves by auburn. Vala Mal Doran and her partners, renegades Jehan abd-Ba'al and Meredith McKay, hijack the Tau'ri ship Prometheus and leave the Milky Way behind in search of the Lost City of the Ancients - Atlantis.

In Sickness And In Health by Eclipse. On a trip to DC, General Jack O'Neill has to deal with a flu-stricken John Sheppard.

Retrograde and Recovery by Martha Wilson. Earth loses touch with Atlantis. The SGC unknowingly sends a ship with Trust operatives to re-establish contact.

What Might Have Been by Keira Marcos. Rodney McKay never went to Atlantis, the mission failed within its first two years and John Sheppard finds himself back on Earth as the second in command of Stargate Command under the leadership of Major General Jack O’Neill. Characters from the Atlantis series and the original SG1 series will figure prominently in all of the stories. This series also contains a heavy SLASH story line for Sheppard and McKay who meet up (finally) after John returns from Atlantis.


Crossovers / Fusions/ Not SGA, but characters in a known universe

The Giant McShep AU list by eldertwitty.

A Tale of a Faithful Trip by cat_77. The Avengers. An emergency evacuation and an EM pulse leave a cobbled together Avenger team stranded, injured, and awaiting rescue. Features Miko.

Don't Make Me Mad by mific. The Avengers. Mensaverse. Rod gets a crash course in anger management and John takes roleplay to extremes.

A Widow's Tale by Mhalachai. The Avengers. Tales of The Black Widow.

See also Iron Man.

Standing Tall by wildforce71. Buffy, Charmed, Medium, Lie to Me, Power Rangers: Wild Force and Mystic Force. The citizens of Atlantis have seen a lot in their four years. But they're not prepared for the chaos two Slayers, two witches, a Seer and team leader Xander bring with them.

The Spirit Of Christmas Yet To Come by sgamadison. Castle. It's Christmas Eve and everyone wants crime writer John Sheppard. Will Detective Rodney McKay add his name to the list?

Dead Like Them: Dead Man Walking by mad_gaters. Dead Like Me. Rodney finally finds love with John. Too bad they're both dead. Unfinished, last updated July 18, 2007.

Acceptance by Macx. Dragonriders of Pern. John is a Dragonrider, Rodney is a Healer with a secret.

Dragonlord by Icarus. Dragonriders of Pern. A bewildered John, lead contender to the Hold of Benden, is caught in the culture of the Dragonweyr when he inadvertently Impresses a dragon.

Here There Be Dragons by ferwyn. Dragonriders of Pern. What if the way to the Sagittarius sector took a detour through a rip in space and time and the Pern expedition landed in the Pegasus galaxy 2500 years ago?

On the Wings of Imagination by xparrot. Dragonriders of Pern. Rodney is a Smith, Sheppard a newly hatched Bronze Dragon. Continued in With Healing In His Wings.

Eureka crossovers by astheblackrosewilts.

The Games We Play by forcryinoutloud. Eureka. Original link was deleted.

A Perfect Thirty-Nine Megahertz by honey_babes. Eureka. Also A Little Town Called Eureka.

Summer House by rageprufrock. Eureka. John and Rodney are in Eureka so John can recover from a leg injury. The boys make return visits in Shore Leave, Sabbatical, and Shenanigans

Can't Take The Sky by sardonicsmiley. Firefly. John as a combination of Mal and Wash (because nobody flies a ship in a fic when John can), Teyla as Zoe, Cadman is Jayne, Elizabeth is Shepherd Book, Carson, of course, is the ship's doctor. In an inspired bit of casting, Ronon takes on the Inara role on the Atlantis. Oh, and Rodney is Kaylee/River. A few chapters, the author says that she won't be continuing the story. Author has left fandom. Original website is gone, use the Wayback Machine to access story.

Rock Happy by ArwenLune. Generation Kill / SG1. Sgt. Brad Colbert has been on a lot of strange missions, but this promises to be his most out there yet: Atlantis.

Clarke's Law by Isis. Harry Potter. Carson Beckett had no regrets about giving up the wizarding world. But what if Magic holds the key to saving Atlantis?

Songs Across the Ocean by mhalachai. Harry Potter. John Sheppard once went by another name.

Divergent Paths: Glimpses of the Future by puddleofgoo. Hawaii 5-0 eventually. Rodney is a wealthy Nobel winning physicist living on the Isle of Man. He hires John as his personal pilot. John has his usual black mark from Afghanistan and was working as a charter pilot. After an attempt on Rodney's life, John says Rodney needs his good friend Steve McGarrett as the head of security. Written after 5-0 season 1 finale since incidents from that episode are in the fic. Other details: Radek is trying to get Rodney to join him in a classified government job, Carson is Rodney's personal doctor, Sam Carter is McKay's ex-wife, John and Lorne know each other.

Family History by Sealie. Hawaii 5-0 crossover in an SGA/Traders AU. Also crossover with The Listener. Occurs after Voyage par Mer, although it can be read independently.

Unconventional Heroism by sardonicsmiley. Iron Man. John is a reporter. Rodney is a multimillionaire with an unusual body guard.

Cycle and Circuit by Alloy. The Last Airbender. Mer is a Waterbender. Zohn is a Firebender. Or is he?

I Don't Do Floors (the Rest is Negotiable) by danceswithgary. The Librarian: Quest for the Spear remix. With SG-1 and Jeannie.

Destiny Revisited by lavvyan. Rodney used to be Merlin, but he's the only one that remembers.

Come What May by forcryingoutloud. NCIS / SG1. Summary: "If I had killed the Lieutenant, I certainly wouldn't be stupid enough to then call the police!" Also at Wraithbait.

Four Military Men by Lady Ra. NCIS / Sentinel / SG1. Blair, Tony, Daniel and Rodney all meet in high school and become good friends. When their twenty year high school reunion comes around, Tony decides to get them all to attend--with their significant others.

The Lost Colony by Joolz. Numb3rs. In the Pegasus Galaxy, a puzzle is found that only one man can solve. The Eppes brothers go traveling.

Second Star to the Right by icantfollow. Peter Pan. John is Peter Pan, Rodney is Wendy, Jeannie is Rodney's sister who will need rescuing and Radek in the Tinkerbell role.

The Criss-Cross AU by quasar273. Sentinel / SG1. John was in California when he got sucked into an alternate (our Atlantis) universe. When he was sent back to his own universe, he ended up in Atlantis. Rodney was taken over by a Go'uld and wasn't an original expedition member, he managed to get to Atlantis 2 years later. Blair and Ellison were kidnapped by the Trust and went on the Atlantis expedition to stay out of their reach. Together they make up a team.

The Friendship Series by lessaperrie. Sentinel / SG1. Rodney visits his friend Blair and John comes along.

The Trust Series by lessaperrie. Sentinel / SG1. More Sentinel stories.

The Sentinels of Atlantis by Keira Marcos. Sentinel / SG1. The author's own take about Sentinels. John's the Sentinel and Rodney's the Guide. Daniel and Sam are another pair.

A SGA Sentinel and Guide by ladyholder. Sentinel. Rodney is the guide, John is the sentinel. A prequel to SGA Rising.

Imperfections by Dasha. Sentinel. Rodney is a fragile Sentinel working as a structural engineer and he just hired a new guide named John Sheppard.

Index to Dasha's Imperfection series of Sentinel crossovers.

The Sentinel And Guide Of Atlantis by Belladonna. Sentinel crossover with Blair and Ellison.

A Lesson in Evil by Madison. Sherlock Holmes. A series of bizarre murders has Holmes and Watson on the hunt for a dangerous killer, but it is the arrival of strangers that has Watson questioning everything he knows.

High School Heroes by sardonicsmiley. Sky High movie. John and Rodney as teen-aged mutants. WIP, but apparently will never be revisited since the author left fandom. Old link at purged Live Journal.

Gene Therapy by LadyRa11. Smallville. The Atlantis team meets Clark Kent and Lex Luthor.

The Stars My Destination by Mad_Maudlin. Star Trek. When a terror from out of time threatens the heart of the Federation, the crew of the USS Atlantis must band together in order to stop it.

The Dark Side by astrolat. Star Wars. Rodney's a Jedi (really!) and John's a Sith Lord.

Code of Honor by Reddwarfer. Star Wars. John Sheppard, former Republic soldier, was lost after a devastating war, and the tragedy that followed, until he met three people who changed his world and gave him something worth fighting for.

What Happens in Vegas by savingfaith. Supernatural. Two teams are hunting Wraith.

Distant Memories by Tarlan. Survivor movie. After becoming the Chief Medical Officer on Atlantis, Rodney's medical skills are put to the test when the exploration of the Ancient Medical facility on the north pier sets in motion a sequence of disastrous events.

Voyage par Mer by Sealie. Traders. Rodney's cousin Grant Jansky learns about the Stargate program. Continues on Two Fan Fic Addicts LiveJournal with eventual crossover with Hawaii 5-0 in Family History.

Damned Underground Monsters by Silvarbelle. Tremors. When something starts killing off the locals, it's up to John Sheppard, Jack O'Neill, and Rodney McKay (astrophysicist, engineer, and soon-to-be seismologist) to dig up the dirt on what's shaking down Perfection Valley, Nevada.

Companion 'verse by seekergeek. Valdemar fusion. Rodney was happy being a math and engineering teacher in the Kingdom. But a horse named Cadman Chose him to be a Herald. Now he's attending classes with students younger than him learning things like Politics and Weapons and how to manage his Gift of Mindspeak that he's certain will lead to his very ignoble death way before his time. WIP. On Dreamwidth. On Archive of Our Own. Old LJ link.

X by trinityofone. X-Men. Mutants are sent to Atlantis. John is Rogue, Rodney is Wolverine.

With Wings So Bright They Burn by lavvyan. X-Men. Mutants are sent to Atlantis.

Good Guys Don't Always Wear White by pertifity. X-Men. Rodney McKay, who can pass thru solid objects, is kidnapped by a shape shifting John Sheppard.


Same Actors, Different Roles

A Thing Decided (res judicata) by Yin. First Monday. Julian Lodge visits Atlantis. Moved to author site.

Accidents Happen by Yin. Sherman's March. Rodney McKay and Pete Sherman meet in North Carolina. Moved to Author site.

The Brendan Hypothesis by smittywing. Thoughtcrimes. Rodney thinks John looks a lot like his dead lover, Brendan Dean.

Yin-again's 12 days of Christmas. Tags for her various universes. Can't seem to find this on her new site.

Index to yin-again's crossover fiction.

By Author

amireal

angelfire

astrolat (shallot) Transcendental. A Beautiful Lifetime Event. Time in a Bottle

auburn Ardhanarishvara. Gypsies, Tramps and Thieves.

chelle A Better Fate.

danvers

Gaia

giddy geek

Gilas Cave

Gillian "Cute as..." series (Rodney's consciousness is transferred into a Genii teenaged girl). Oops, or Rodney turns into a 5 year old. The Colonel and his Dragon.

Kageygirl

kellerfic

Jane Elliot

lamardeuse

lavvyan on Wraithbait.

lyllyjk

mice

miss pamela

moonlettuce photobucket

sardonicsmiley. Firefly crossover. John from every fanfic universe.

Sealie Traders fic. Continues at Two Fan Fic Addicts (jimandblair) LJ.

seperis The Atlantis Project AU.

sgatlantislight

shallot A Beautiful Lifetime Event.

stillane

tarlan The Lonely Sea (Waterworld AU). Emergency Colors.

tigerlady

tipper_green Down Came a Spider.

trinityofone

Water Gate-stories by Martha Wilson.

Yin

Silent Wings-David and Joe

Do Not Go Gentle. Stories deleted from the internet.

The Best Things In Life Are Free (High School AU)

The Secret Lives of Scientists by Julad. On AO3. On LiveJournal.

Intersections

Ripples in the Space Between by mardahin. Letters from an OB/GYN. Abandoned by Earth. The Children of Atlantis.



Indexes

Atlantis Slash index



Photos and Icons

TJUK photos

moonlettuce photobucket

traders



Meta

Newbie Guide

Approaching Vulnerable: The Evolution of Dr. Rodney McKay

SG Research

SGA Research

SGA Reference

Rodney went to Northeastern and his middle name is Ingram.

More about what's on Rodney wall.

McKay info dump

Gen

Team gen

And The Sky Was Dark by Kodiak Bear Country. The team is trapped and injured in an underworld city. John is blind, McKay suffers from headaches and a shaking hand. 2006.

Empty Bottle by gaffer42. A different take on SG1's "Message in a Bottle". This time it's McKay pinned to the wall. 2005.

How the Grinch Saved Christmas by technoscribe. McKay isn't the Grinch everyone thinks he is. 2006.

Of Memories Past by Wraithfodder. On a icy planet, stories are swapped around the fire. McKay tells his story of a childhood sled ride. 2004.

Under Glass by nottasha. Sheppard, McKay, Teyla, Ronon. While investigating an Ancient transporter system off planet, McKay gets trapped in one of the cubicles. 2006.

The Young Ancients By C. L. Combs. Rodney has an allergic reaction to being stung by an alien creature's tail, Koyla shows up to kidnap Rodney and John. SG1 and some cats help save the day. Season 1 references. 2005.


McKay Sheppard gen

Plumber's Helper by Sholio. Newly arrived in Atlantis, one of the first orders of the day is to find a working bathroom.

There and Back Again by Merlin7 M.N. Talbert. Rodney and John crash on a planet and must make their way back to the Stargate. Rodney can't walk because of a badly injured knee and John is suffering form a concussion. Lots of Lord of the Rings references. 2005.


McKay and his medical conditions - gen

The Doctor Who Cried Wolf by TechnoScribe. Rodney has a reason to complain when they give up all their food to the locals. 2006.

Shock by frostfire. You gotta hate alien food rituals. 2005.

Unexpectedly Lucky by Ellenx. Who reads the ingredients in toothpaste? 2006.

War of Wills by OXBastetXO. Rodney eats an MRE that Kavanaugh spikes with lemon juice. While still recovering, Rodney challenges Kavanaugh to a duel of sorts. 2004.


Sheppard gen

Just Like the Richard Gere Movie by miss_porcupine. Sheppard from the POV of an enlisted man. Pre-Atlantis. 2006.


Episodic

Siege
Cosecant by Domenika Marzione. O'Neill has a talk with Sheppard on Earth after the events of the Siege. 2005.

Trinity
That Which Is Broken by sholio. After the events of Doranda, Teyla and Zelenka come up with a plan to get McKay and Sheppard talking to each other again. But when does a plan ever work out the way you want it to in Atlantis? 2006.

The Pegasus Project (SG1)
When Life Gives You Lemons by Linnzi. One the way back from destroying the Ori ship, McKay, Carter and Mitchell take time out for dinner. 2006.

Sunday
When Every Day by Aelfgyfu. Dr. Heightmeyer sees Rodney after the events of Sunday and Submersion.


Original Atlantis

-.-. --- -. -. . -.-. - .. --- -. by MadMaudlin. (Connection) The Morse Code fic. Rodney loses the ability to see and hear. 2009.

The Ghost of Christmas Could Have Been by liketheriver. A Christmas tale where the team is forced to consider the choices they’ve made along the way and how the effects of alternate decisions could have changed the fates of them all. 2006.

War of Wills by OXBastetXO. Kavanaugh almost kills McKay with a prank gone wrong. To decide who really deserves the position of Chief Scientist, a competition is devised that will prove who is the better man. 2004.

Breaking Walls by TechnoScribe. Crossover with SG1. Rodney is more than just a genius, he can move things with his mind, too. 2006. WIP

Down Came a Spider by Tipper. Crossover with SG1. The Wraith target their most dangerous human enemy, but they didn't count on the bull-headed resilience of his friends. 2006.


Stargate, but not Atlantis

The Shadow Over Chatsworth by Martha. Daniel and Rodney are stranded in the middle of nowhere on their way to Huntsville, and encounter some townsfolk that turn out to be not quite normal.


AU

Damper by michele72. Teyla Emmagan (C.W.El.E., L.W.M.) and Dr. Rodney McKay (C.W.El.F., Ph.D., Ph.D.) are hired to investigate an anomalous geological development, but they soon learn much more is at stake. Story focuses on Teyla and Rodney. The team are Elementalists: Teyla - Earth, Rodney - Fire, John - Air, Ronon - Water. 2010. Also A Few Small Repairs (Epilogue). 2010.

We Fought In a War by clockstopper. What if Radek Zelenka was made head of Atlantis instead of Samantha Carter? Big Bang 2008.

Untamed by Negolith. Project Atlantis is a top secret think tank located in the Pacific Northwest. Acastus Kolya, the project's second in command, has been using its resources for his own agenda, and now he and his scientist Chaya are eager to play with his newest specimen - John Sheppard.


Transformations

The Illustrated Rodneysaur by moonloon. (orignal link broken) Rodney gets turned into a dinosaur. Google cache here until it's gone. ETA: Checked original link on 2/5/2009 and it's back. ETA. Checked 12/19/2015 and Google cache is gone. However, the page is in the Wayback Machine, last fully saved in Jan 2010. 2006.

Darkness Is the Only Sound by michelel72. The expedition finds surprising signs of a long-missing race, but a greater surprise lies in store. McKay doesn't remember, but he's not human. 2011.

Thursday's Child by Terrie. McKay touches an Ancient console. He falls unconscious and a 7 year old clone is created. 2006.


Crossovers/Fusions

Birds of a Feather by julia_here. Due South. The lives of Benton Frasier and Rodney McKay intersect. 2009.

Here There Be Dragons by ferwyn. What if the way to the Sagittarius sector took a detour through a rip in space and time and the Pern expedition landed in the Pegasus galaxy 2500 years ago? SGA/Dragonriders of Pern crossover. 2008.

Clarke's Law by Isis. Any sufficiently advanced technology is indistinguishable from magic. Features Carson. Crossover with "Harry Potter", mainly Hermoine. 2005.



Het

AU
Sheppard/Weir
A Change of Scenery by miera. Elizabeth's appointment with some cheesecake gets derailed when she stops to help a bleeding stranger. 2006? Original link gone. Found on the Wayback Machine here on June 17, 2011.

Fic lists - links verified March 7, 2013

List of lists by debris-k. Contains most, if not all of the lists below.

Crossroads - SGA slash index

fairestcat recs. Dated Mar 28, 2007.

house_of_pants delicious sga tags. house_of_pants live journal purged.

Rodney's Miserable Childhood Masterlist UPDATED:20/11/08 by korilian

The Deranged McKay Master list Part 1, Update: 06/02/08 by korilian. Features The Serious Mental Health Problem list and The Nervous Breakdown list.

The Deranged McKay Master list Part 2, Update: 02/11/07 by korilian. Features The OMG They Broke Rodney list and The Flying High List.

The Awesomely Improbable SGA PORN Master list UPDATE:02/11/07 by korilian

List of episode related gen fanworks by lessaperrie. Last updated Jan 2012.

Sam/Rodney list by lysora. LJ locked. DW journal locked. Website gone.

lysora fics at sga-flashfic

A Genius Idea. Sam and Rodney stories on fanfiction.net

Pick-Me-Up Fics Rec Listby outsideth3box

pentapus recs. Dated 2-20-2006.

popkin16 recs

rhydwen recs. Includes Thematic List of Stargate Latin and Ballroom Dance Fics.

Sam and Rodney comm on LJ

Fic recs list by sapphirestar_

seperis SGA recs. seperis fics on AOOO.

Were you looking for that story where... list by skaredykat

Fic recs list by unamaga


Post Trinity fics by iibnf

SGA Transformation fic recs part 1 by debris_k

SGA Transformation fic recs part 2 by debris_k

Giant McShep AU fic list by Sheppard's job (A thru K) by elderwitty

Giant McShep AU fic list by Sheppard's job (L thru Z) by elderwitty

Giant McShep AU list on one page

ratcreature has a bunch of thematic lists and recs. Updated 2012.
- Alternate Universe recs
- Crossover with other fandoms
- Alien cultures and new non-human aliens
- Wraith/Iratus bug transformations
- John Sheppard as Ancient, Ori or Ascended
- Atlantis is cut off from Earth or secedes
- Werewolves and other wereanimals
- Wingfic list

Blue Skies after the Storm
by SpencnerTibbsLuvr (KliqzAngel)
Anthony DiNozzo/Alec Trevelyan
Summary: When everyone around him at NCIS decides it's ok to seek vengeance instead of uphold the law, Tony knows that he has to get out. This leads him to a new home, a second chance at romance, and a future he never imagined that he could have.


London's Calling
by SpencnerTibbsLuvr (KliqzAngel)
Anthony DiNozzo/Alec Trevelyan
Summary: When things come to a head between Tony and Gibbs in the bullpen, the last thing Tony expected was for Vance to be on his side and a promotion on top of it! Yet, three weeks later, he and his son TJ were headed to London. Along the way, there would be a new team, a new love, and a family he’d only ever dreamed of having.

http://eruthros.dreamwidth.org/255…

http://community.livejournal.com/s…

The Boys of St Vincent from the POV of a Joe Flanigan character (reporter, detective?).

eta: second request.

http://community.livejournal.com/s…