Entry - #620602 - LYMPHATIC MALFORMATION 14; LMPHM14 - OMIM - (OMIM.ORG)

# 620602

LYMPHATIC MALFORMATION 14; LMPHM14


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
21q22.2 Lymphatic malformation 14 620602 AD 3 ERG 165080
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
MUSCLE, SOFT TISSUES
- Primary lymphedema
MISCELLANEOUS
- Based on 1 report with limited clinical information (last curated November 2023)
MOLECULAR BASIS
- Caused by mutation in the ETS transcription factor ERG gene (ERG, 165080.0001)

TEXT

A number sign (#) is used with this entry because of evidence that lymphatic malformation-14 (LMPHM14) is caused by heterozygous mutation in the ERG gene (165080) on chromosome 21q22.


Description

Lymphatic malformation-14 (LMPHM14) is an autosomal dominant disorder characterized by primary lymphedema (Greene et al., 2023).

For a general phenotypic description and discussion of genetic heterogeneity of lymphatic malformation, see LMPHM1 (153100).


Clinical Features

Greene et al. (2023) reported 5 affected individuals from 4 unrelated families with primary lymphedema and mutation in the ERG gene. Limited clinical information was published for the affected individuals, who were ascertained from a cohort of 77,539 participants, including 29,741 probands, tabulated in a relational database (Rareservoir) developed as part of the 100,000 Genomes Project (100KGP). One proband had a mildly affected father who developed lymphedema 2 decades later than his daughter; he was found to be mosaic for their ERG variant. In another family, the proband was enrolled in 100KGP for an unrelated condition, but chart review revealed that she exhibited additional features consistent with primary lymphedema.


Inheritance

The transmission pattern of LMPHM14 in the families reported by Greene et al. (2023) was consistent with autosomal dominant inheritance.


Molecular Genetics

Using a Bayesian statistical method (BeviMed) to obtain a posterior probability of association between variation in 19,663 protein-coding genes and a case set of 94 probands with primary lymphedema, Greene et al. (2023) identified a dominant genetic association between primary lymphedema and frameshift variants in the ERG gene (see, e.g., 165080.0001-165080.0003) in 4 affected individuals from 3 unrelated families. A participant in a fourth family, enrolled in 100KGP for an unrelated condition, also carried a predicted ERG loss-of-function variant; manual chart review revealed that the proband had additional features consistent with primary lymphedema. Functional analysis demonstrated mislocalization of the mutant ERG in the cytosol rather than the nucleus, which would prevent it from binding to DNA and exerting its function as a transcription factor. The authors suggested that defective lymphangiogenesis in these ERG-associated primary lymphedema cases might result from reduced ERG availability in the nucleus, due to haploinsufficiency from nonsense-mediated decay or due to mislocalization.


REFERENCES

  1. Greene, D., Genomics England Research Consortium, Pirri, D., Frudd, K., Sackey, E., Al-Owain, M., Giese, A. P. J., Ramzan, K., Riaz, S., Yamanaka, I., Boeckx, N., Thys, C., and 22 others. Genetic association analysis of 77,539 genomes reveals rare disease etiologies. Nature Med. 29: 679-688, 2023. [PubMed: 36928819, images, related citations] [Full Text]


Creation Date:
Marla J. F. O'Neill : 11/14/2023
Edit History:
alopez : 11/14/2023

# 620602

LYMPHATIC MALFORMATION 14; LMPHM14


MONDO: 0957954;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
21q22.2 Lymphatic malformation 14 620602 Autosomal dominant 3 ERG 165080

TEXT

A number sign (#) is used with this entry because of evidence that lymphatic malformation-14 (LMPHM14) is caused by heterozygous mutation in the ERG gene (165080) on chromosome 21q22.


Description

Lymphatic malformation-14 (LMPHM14) is an autosomal dominant disorder characterized by primary lymphedema (Greene et al., 2023).

For a general phenotypic description and discussion of genetic heterogeneity of lymphatic malformation, see LMPHM1 (153100).


Clinical Features

Greene et al. (2023) reported 5 affected individuals from 4 unrelated families with primary lymphedema and mutation in the ERG gene. Limited clinical information was published for the affected individuals, who were ascertained from a cohort of 77,539 participants, including 29,741 probands, tabulated in a relational database (Rareservoir) developed as part of the 100,000 Genomes Project (100KGP). One proband had a mildly affected father who developed lymphedema 2 decades later than his daughter; he was found to be mosaic for their ERG variant. In another family, the proband was enrolled in 100KGP for an unrelated condition, but chart review revealed that she exhibited additional features consistent with primary lymphedema.


Inheritance

The transmission pattern of LMPHM14 in the families reported by Greene et al. (2023) was consistent with autosomal dominant inheritance.


Molecular Genetics

Using a Bayesian statistical method (BeviMed) to obtain a posterior probability of association between variation in 19,663 protein-coding genes and a case set of 94 probands with primary lymphedema, Greene et al. (2023) identified a dominant genetic association between primary lymphedema and frameshift variants in the ERG gene (see, e.g., 165080.0001-165080.0003) in 4 affected individuals from 3 unrelated families. A participant in a fourth family, enrolled in 100KGP for an unrelated condition, also carried a predicted ERG loss-of-function variant; manual chart review revealed that the proband had additional features consistent with primary lymphedema. Functional analysis demonstrated mislocalization of the mutant ERG in the cytosol rather than the nucleus, which would prevent it from binding to DNA and exerting its function as a transcription factor. The authors suggested that defective lymphangiogenesis in these ERG-associated primary lymphedema cases might result from reduced ERG availability in the nucleus, due to haploinsufficiency from nonsense-mediated decay or due to mislocalization.


REFERENCES

  1. Greene, D., Genomics England Research Consortium, Pirri, D., Frudd, K., Sackey, E., Al-Owain, M., Giese, A. P. J., Ramzan, K., Riaz, S., Yamanaka, I., Boeckx, N., Thys, C., and 22 others. Genetic association analysis of 77,539 genomes reveals rare disease etiologies. Nature Med. 29: 679-688, 2023. [PubMed: 36928819] [Full Text: https://doi.org/10.1038/s41591-023-02211-z]


Creation Date:
Marla J. F. O'Neill : 11/14/2023

Edit History:
alopez : 11/14/2023