GitHub - siyuh/Squidiff_reproducibility

The checkpoint for a few trained models in the paper have been released in figshare [https://doi.org/10.6084/m9.figshare.27948633].

Please send me email (siyuhe@stanford.edu) if I didn't reply to Github Issues in time. Thank you!

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
README.md		README.md
fig4_VO_reproducibility.ipynb		fig4_VO_reproducibility.ipynb
prep_diff_data.ipynb		prep_diff_data.ipynb
prep_double_drug_data.ipynb		prep_double_drug_data.ipynb
prep_drug_screen_data.ipynb		prep_drug_screen_data.ipynb
prep_pertb_data.ipynb		prep_pertb_data.ipynb
prep_sciplex_data.ipynb		prep_sciplex_data.ipynb
prep_simu_data.ipynb		prep_simu_data.ipynb
preprocess_fig2_data.ipynb		preprocess_fig2_data.ipynb
squidiff_on_combdrug.ipynb		squidiff_on_combdrug.ipynb
squidiff_on_differentiation.ipynb		squidiff_on_differentiation.ipynb
squidiff_on_gbm.ipynb		squidiff_on_gbm.ipynb
squidiff_on_genepertb.ipynb		squidiff_on_genepertb.ipynb
squidiff_on_sciplex.ipynb		squidiff_on_sciplex.ipynb
squidiff_on_simulated_data.ipynb		squidiff_on_simulated_data.ipynb

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