That window may come from a client on a different machine, or from a client on this machine but which is connecting to the X server via TCP. Why don't you xkill it?
You may also want to try its parent windows run
xwininfo -children -id 0x04c00004
to figure it out. And then you can check if the parent window has a pid.
ps -fp "$(
xprop -id "$(
xwininfo -children -id 0x04c00004 |
sed -n 's/.*Parent window id: \([^ ]*\).*/\1/p'
)" _NET_WM_PID | sed 's/.* //'
)"