(Q36238793)

13 August 2017

A mixed-integer linear programming approach to the reduction of genome-scale metabolic networks (English)

1 reference

13 August 2017

0 references

1 reference

Alexander Bockmayr

2

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author name string

Annika Röhl

series ordinal

1

1 reference

13 August 2017

3 January 2017

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13 August 2017

1 reference

13 August 2017

18

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13 August 2017

1

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13 August 2017

2

1 reference

An algorithm for the reduction of genome-scale metabolic network models to meaningful core models.

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Using Genome-scale Models to Predict Biological Capabilities

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

An efficient graph theory based method to identify every minimal reaction set in a metabolic network

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Fast Reconstruction of Compact Context-Specific Metabolic Network Models

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Modes and cuts in metabolic networks: complexity and algorithms

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Flux coupling analysis of genome-scale metabolic network reconstructions.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Optknock: a bilevel programming framework for identifying gene knockout strategies for microbial strain optimization

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Analysis of optimality in natural and perturbed metabolic networks

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Double and multiple knockout simulations for genome-scale metabolic network reconstructions

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Flux coupling analysis of metabolic networks is sensitive to missing reactions

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Computing knock-out strategies in metabolic networks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Analysis of structural robustness of metabolic networks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Minimal cut sets in biochemical reaction networks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Minimal reaction sets for Escherichia coli metabolism under different growth requirements and uptake environments

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

Robustness analysis of the Escherichia coli metabolic network

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

METATOOL: for studying metabolic networks.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210269

ON ELEMENTARY FLUX MODES IN BIOCHEMICAL REACTION SYSTEMS AT STEADY STATE

22 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-016-1412-Z

Structural robustness of metabolic networks with respect to multiple knockouts

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28049424

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12859-016-1412-Z

1 reference

13 August 2017

journals/bmcbi/RohlB17

1 reference

DBLP Dataset 2021-01-02

Dimensions publication ID

28 January 2021

0 references

1 reference

PMC publication ID

5210269

13 August 2017

PubMed publication ID

28049424

1 reference

PMC publication ID

5210269