(Q33980339)

24185095

30 July 2017

title

Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions (English)

1 reference

30 July 2017

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Joshua N Burton

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Jacob O Kitzman

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

author name string

Andrew Adey

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Rupali P Patwardhan

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Ruolan Qiu

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

publication date

3 November 2013

1 reference

24185095

30 July 2017

language of work or name

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

volume

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

page(s)

1119-1125

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

The haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell line

4 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

The genomic and transcriptomic landscape of a HeLa cell line

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

The genome of Prunus mume

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

The expanding scope of DNA sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

The oyster genome reveals stress adaptation and complexity of shell formation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

MORC family ATPases required for heterochromatin condensation and gene silencing.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Topological domains in mammalian genomes identified by analysis of chromatin interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

The Drosophila melanogaster Genetic Reference Panel

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Three-dimensional folding and functional organization principles of the Drosophila genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

How to apply de Bruijn graphs to genome assembly

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Haplotype-resolved genome sequencing of a Gujarati Indian individual.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Hi-C: a method to study the three-dimensional architecture of genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

A three-dimensional model of the yeast genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Fast and accurate long-read alignment with Burrows-Wheeler transform

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

De novo assembly of human genomes with massively parallel short read sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Rapid SNP discovery and genetic mapping using sequenced RAD markers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Next-generation DNA sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Finishing the euchromatic sequence of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Comprehensive and definitive molecular cytogenetic characterization of HeLa cells by spectral karyotyping

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Cluster analysis and display of genome-wide expression patterns

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Ordered restriction maps of Saccharomyces cerevisiae chromosomes constructed by optical mapping

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Basic local alignment search tool

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117202

Initial sequencing and analysis of the human genome

28 July 2018

1 reference

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

21 January 2018

1 reference

Initial sequencing and comparative analysis of the mouse genome

21 January 2018

1 reference

Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus).

21 January 2018

1 reference

Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly

21 January 2018

1 reference

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture

21 January 2018

1 reference

High-resolution identification of balanced and complex chromosomal rearrangements by 4C technology

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1038/NBT.2727

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

Dimensions publication ID

4 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

24185095

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24185095%20AND%20SRC:MED&resulttype=core&format=json