(Q41891172)

13 October 2017

vipR: variant identification in pooled DNA using R (English)

1 reference

10.1093/BIOINFORMATICS/BTR205

Crossref

DOI

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTR205

4 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

single-nucleotide polymorphism

4 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

4 December 2024

software

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

4 December 2024

author

Bertram Müller-Myhsok

series ordinal

6

object named as

Bertram Müller-Myhsok

1 reference

13 October 2017

5

Elisabeth B Binder

1 reference

13 October 2017

3

Carina Quast

1 reference

13 October 2017

4

Monika Rex-Haffner

1 reference

13 October 2017

1

Andre Altmann

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

4 December 2024

author name string

Peter Weber

series ordinal

2

1 reference

13 October 2017

Elisabeth B. Binder

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

4 December 2024

publication date

1 July 2011

1 reference

https://academic.oup.com/bioinformatics/article-pdf/27/13/i77/48883573/bioinformatics_27_13_i77.pdf

13 October 2017

language of work or name

English

0 references

work available at URL

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

https://europepmc.org/articles/PMC3117388

4 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21685105

https://academic.oup.com/bioinformatics/article-pdf/27/13/i77/48883573/bioinformatics_27_13_i77.pdf

4 December 2024

1 reference

10.1093/BIOINFORMATICS/BTR205

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTR205

4 December 2024

1 reference

13 October 2017

27

1 reference

13 October 2017

13

1 reference

13 October 2017

i77-84

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

13 October 2017

start time

2 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A map of human genome variation from population-scale sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Sequencing of 50 human exomes reveals adaptation to high altitude

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

A statistical method for the detection of variants from next-generation resequencing of DNA pools

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Genome variation discovery with high-throughput sequencing data

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Finding the missing heritability of complex diseases

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

The Sequence Alignment/Map format and SAMtools

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Fast and accurate short read alignment with Burrows-Wheeler transform

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Quantification of rare allelic variants from pooled genomic DNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Personal genomes: The case of the missing heritability

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Next-generation DNA sequencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Mapping short DNA sequencing reads and calling variants using mapping quality scores

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Heritability in the genomics era — concepts and misconceptions

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Genome resequencing and genetic variation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Characterization of mutation spectra with ultra-deep pyrosequencing: application to HIV-1 drug resistance

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

High-resolution genotyping by amplicon melting analysis using LCGreen

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

TMEM132D, a new candidate for anxiety phenotypes: evidence from human and mouse studies

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

Deep sequencing to reveal new variants in pooled DNA samples

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117388

The frequency distribution of the difference between two Poisson variates belonging to different populations

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21685105

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTR205

1 reference

journals/bioinformatics/AltmannWQRBM11

13 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

13 October 2017

1 reference