(Q30393780)

28 September 2017

An efficient algorithm for protein structure comparison using elastic shape analysis (English)

1 reference

28 September 2017

S Srivastava

1

1 reference

28 September 2017

S B Lal

2

1 reference

28 September 2017

D C Mishra

3

1 reference

28 September 2017

U B Angadi

4

1 reference

28 September 2017

K K Chaturvedi

5

1 reference

28 September 2017

S N Rai

6

1 reference

28 September 2017

A Rai

7

1 reference

28 September 2017

29 September 2016

1 reference

Algorithms for Molecular Biology

28 September 2017

1 reference

28 September 2017

11

1 reference

28 September 2017

27

1 reference

RNA global alignment in the joint sequence–structure space using elastic shape analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

The difficulty of protein structure alignment under the RMSD

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

CSA: comprehensive comparison of pairwise protein structure alignments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

A Mathematical Framework for Protein Structure Comparison

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Shape Analysis of Elastic Curves in Euclidean Spaces

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

FlexSnap: flexible non-sequential protein structure alignment.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Advances and pitfalls of protein structural alignment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Structure of haemoglobin: a three-dimensional Fourier synthesis at 5.5-A. resolution, obtained by X-ray analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Protein sequence and structure alignments within one framework

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Matt: local flexibility aids protein multiple structure alignment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Comparative analysis of protein structure alignments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

MUSTANG: a multiple structural alignment algorithm

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

FATCAT: a web server for flexible structure comparison and structure similarity searching

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Evaluation of PSI-BLAST alignment accuracy in comparison to structural alignments.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

An alternative view of protein fold space

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

SCOP: a structural classification of proteins database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

20 June 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

A unified statistical framework for sequence comparison and structure comparison

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

CATH--a hierarchic classification of protein domain structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Protein structure comparison by alignment of distance matrices

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

SCOP: a structural classification of proteins database for the investigation of sequences and structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

A simple method for displaying the hydropathic character of a protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Amino acid difference formula to help explain protein evolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Stereochemical quality of protein structure coordinates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

A database of protein structure families with common folding motifs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

Large-scale comparison of protein sequence alignment algorithms with structure alignments

20 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

Structure-based evaluation of sequence comparison and fold recognition alignment accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

Analysis of planar shapes using geodesic paths on shape spaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

On Shape of Plane Elastic Curves

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

Shape Manifolds, Procrustean Metrics, and Complex Projective Spaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

The characterization of amino acid sequences in proteins by statistical methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

Bio3d: an R package for the comparative analysis of protein structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

Evaluation of protein fold comparison servers

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13015-016-0089-1

The CATH domain structure database.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5041553

A Novel Representation for Riemannian Analysis of Elastic Curves in Rn

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27708689

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S13015-016-0089-1

1 reference

journals/almob/SrivastavaLMACR16

28 September 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions publication ID

28 January 2021

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s13015-016-0089-1

1 reference

28 September 2017

PubMed publication ID

27708689

1 reference