Entry - *611495 - CYTOCHROME P450, FAMILY 4, SUBFAMILY F, POLYPEPTIDE 22; CYP4F22 - OMIM - (OMIM.ORG)

 
* 611495

CYTOCHROME P450, FAMILY 4, SUBFAMILY F, POLYPEPTIDE 22; CYP4F22


Alternative titles; symbols

CYTOCHROME P450, SUBFAMILY IVF, POLYPEPTIDE 22


HGNC Approved Gene Symbol: CYP4F22

Cytogenetic location: 19p13.12   Genomic coordinates (GRCh38) : 19:15,508,525-15,552,317 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
19p13.12 Ichthyosis, congenital, autosomal recessive 5 604777 AR 3

TEXT

Cloning and Expression

By database analysis, followed by RT-PCR, Lefevre et al. (2006) cloned CYP4F22, which encodes a 531-amino acid protein with a calculated molecular mass of about 62 kD. CYP4F22 is evolutionarily conserved, displays 86% protein homology with rodent orthologs, and exhibits 67% amino acid homology with CYP4F2 (604426) and CYP4F3 (601270), which are also located in the F subfamily gene cluster on chromosome 19. RT-PCR analysis of human tissues detected high expression in culture keratinocytes and testis with lower expression in placenta, bone marrow, small intestine, liver, skeletal muscle, brain, and kidney.


Gene Structure

Lefevre et al. (2006) determined that the CYP4F22 gene contains 12 exons.


Mapping

Lefevre et al. (2006) noted that the CYP4F22 gene maps to chromosome 19p13.12.


Molecular Genetics

By linkage analysis of 12 consanguineous families with autosomal recessive congenital ichthyosis of the lamellar type (ARCI5; 604777), Lefevre et al. (2006) mapped the disease locus to a 3-Mb region on chromosome 19 (lod = 15.83 at D19S930, theta = 0.0). Lefevre et al. (2006) identified 7 different mutations in the CYP4F22 gene (see, e.g., 611495.0001-611495.0004) in the 12 consanguineous families. There were 5 missense mutations and 2 deletions. The phenotype usually presented as lamellar ichthyosis and hyperlinearity of palms and soles. The authors hypothesized that CYP4F22 plays a role in the 12(R)-lipoxygenase pathway that has been implicated in Sjogren-Larsson syndrome (270200) and in congenital ichthyosis (612281) due to mutation in the NIPAL4 gene (609383).

In 4 affected individuals from a large consanguineous Israeli Druze family with ARCI, Lugassy et al. (2008) identified homozygosity for a nonsense mutation in the CYP4F22 gene (W521X; 611495.0005).


ALLELIC VARIANTS ( 5 Selected Examples):

.0001 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, HIS435TYR
  
RCV000000957...

In 1 French and 5 Algerian consanguineous families with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a 1303C-T transition in exon 10 of the CYP4F22 gene, resulting in a his435-to-tyr (H435Y) substitution in a highly conserved region of the protein.


.0002 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, HIS436ASP
  
RCV000000958

In a consanguineous Algerian family with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a 1306C-G transversion in exon 10 of the CYP4F22 gene, resulting in a his436-to-asp (H436D) substitution in a highly conserved region of the protein.


.0003 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, ARG243HIS
  
RCV000000959...

In a consanguineous Algerian family with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a 728G-A transition in exon 6 of the CYP4F22 gene, resulting in an arg243-to-his (R243H) substitution in a highly conserved region of the protein.


.0004 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, EX3-12DEL
   RCV000000960

In a consanguineous Italian family with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a large genomic deletion of exons 3 to 12 of the CYP4F22 gene.


.0005 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, TRP521TER
  
RCV000678428

In 4 affected individuals from a large consanguineous Israeli Druze family with autosomal recessive congenital ichthyosis (ARCI5; 604777), Lugassy et al. (2008) identified homozygosity for a 1563G-A transition in the CYP4F22 gene, predicted to result in a trp521-to-ter (W521X) substitution. The mutation segregated with disease in the family and was not found in 50 controls.


REFERENCES

  1. Lefevre, C., Bouadjar, B., Ferrand, V., Tadini, G., Megarbane, A., Lathrop, M., Prud'homme, J.-F., Fischer, J. Mutations in a new cytochrome P450 gene in lamellar ichthyosis type 3. Hum. Molec. Genet. 15: 767-776, 2006. [PubMed: 16436457, related citations] [Full Text]

  2. Lugassy, J., Hennies, H. C., Indelman, M., Khamaysi, Z., Bergman, R., Sprecher, E. Rapid detection of homozygous mutations in congenital recessive ichthyosis. Arch. Derm. Res. 300: 81-85, 2008. [PubMed: 18034255, related citations] [Full Text]


Contributors:
Marla J. F. O'Neill - updated : 01/17/2013
Creation Date:
George E. Tiller : 10/3/2007
carol : 02/28/2025
carol : 01/17/2013
wwang : 4/28/2011
wwang : 10/3/2007

* 611495

CYTOCHROME P450, FAMILY 4, SUBFAMILY F, POLYPEPTIDE 22; CYP4F22


Alternative titles; symbols

CYTOCHROME P450, SUBFAMILY IVF, POLYPEPTIDE 22


HGNC Approved Gene Symbol: CYP4F22

Cytogenetic location: 19p13.12   Genomic coordinates (GRCh38) : 19:15,508,525-15,552,317 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
19p13.12 Ichthyosis, congenital, autosomal recessive 5 604777 Autosomal recessive 3

TEXT

Cloning and Expression

By database analysis, followed by RT-PCR, Lefevre et al. (2006) cloned CYP4F22, which encodes a 531-amino acid protein with a calculated molecular mass of about 62 kD. CYP4F22 is evolutionarily conserved, displays 86% protein homology with rodent orthologs, and exhibits 67% amino acid homology with CYP4F2 (604426) and CYP4F3 (601270), which are also located in the F subfamily gene cluster on chromosome 19. RT-PCR analysis of human tissues detected high expression in culture keratinocytes and testis with lower expression in placenta, bone marrow, small intestine, liver, skeletal muscle, brain, and kidney.


Gene Structure

Lefevre et al. (2006) determined that the CYP4F22 gene contains 12 exons.


Mapping

Lefevre et al. (2006) noted that the CYP4F22 gene maps to chromosome 19p13.12.


Molecular Genetics

By linkage analysis of 12 consanguineous families with autosomal recessive congenital ichthyosis of the lamellar type (ARCI5; 604777), Lefevre et al. (2006) mapped the disease locus to a 3-Mb region on chromosome 19 (lod = 15.83 at D19S930, theta = 0.0). Lefevre et al. (2006) identified 7 different mutations in the CYP4F22 gene (see, e.g., 611495.0001-611495.0004) in the 12 consanguineous families. There were 5 missense mutations and 2 deletions. The phenotype usually presented as lamellar ichthyosis and hyperlinearity of palms and soles. The authors hypothesized that CYP4F22 plays a role in the 12(R)-lipoxygenase pathway that has been implicated in Sjogren-Larsson syndrome (270200) and in congenital ichthyosis (612281) due to mutation in the NIPAL4 gene (609383).

In 4 affected individuals from a large consanguineous Israeli Druze family with ARCI, Lugassy et al. (2008) identified homozygosity for a nonsense mutation in the CYP4F22 gene (W521X; 611495.0005).


ALLELIC VARIANTS 5 Selected Examples):

.0001   ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, HIS435TYR
SNP: rs118203935, gnomAD: rs118203935, ClinVar: RCV000000957, RCV000412942, RCV001582456

In 1 French and 5 Algerian consanguineous families with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a 1303C-T transition in exon 10 of the CYP4F22 gene, resulting in a his435-to-tyr (H435Y) substitution in a highly conserved region of the protein.


.0002   ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, HIS436ASP
SNP: rs118203936, gnomAD: rs118203936, ClinVar: RCV000000958

In a consanguineous Algerian family with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a 1306C-G transversion in exon 10 of the CYP4F22 gene, resulting in a his436-to-asp (H436D) substitution in a highly conserved region of the protein.


.0003   ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, ARG243HIS
SNP: rs118203937, gnomAD: rs118203937, ClinVar: RCV000000959, RCV001731266

In a consanguineous Algerian family with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a 728G-A transition in exon 6 of the CYP4F22 gene, resulting in an arg243-to-his (R243H) substitution in a highly conserved region of the protein.


.0004   ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, EX3-12DEL
ClinVar: RCV000000960

In a consanguineous Italian family with autosomal recessive congenital ichthyosis (ARCI5; 604777) of the lamellar type, Lefevre et al. (2006) identified homozygosity for a large genomic deletion of exons 3 to 12 of the CYP4F22 gene.


.0005   ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 5

CYP4F22, TRP521TER
SNP: rs1360295659, gnomAD: rs1360295659, ClinVar: RCV000678428

In 4 affected individuals from a large consanguineous Israeli Druze family with autosomal recessive congenital ichthyosis (ARCI5; 604777), Lugassy et al. (2008) identified homozygosity for a 1563G-A transition in the CYP4F22 gene, predicted to result in a trp521-to-ter (W521X) substitution. The mutation segregated with disease in the family and was not found in 50 controls.


REFERENCES

  1. Lefevre, C., Bouadjar, B., Ferrand, V., Tadini, G., Megarbane, A., Lathrop, M., Prud'homme, J.-F., Fischer, J. Mutations in a new cytochrome P450 gene in lamellar ichthyosis type 3. Hum. Molec. Genet. 15: 767-776, 2006. [PubMed: 16436457] [Full Text: https://doi.org/10.1093/hmg/ddi491]

  2. Lugassy, J., Hennies, H. C., Indelman, M., Khamaysi, Z., Bergman, R., Sprecher, E. Rapid detection of homozygous mutations in congenital recessive ichthyosis. Arch. Derm. Res. 300: 81-85, 2008. [PubMed: 18034255] [Full Text: https://doi.org/10.1007/s00403-007-0815-0]


Contributors:
Marla J. F. O'Neill - updated : 01/17/2013

Creation Date:
George E. Tiller : 10/3/2007

Edit History:
carol : 02/28/2025
carol : 01/17/2013
wwang : 4/28/2011
wwang : 10/3/2007