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mjoppich/README.md
  • 👋 Hi, I’m Markus !
  • 👀 I’m interested in Integrative Bioinformatics, particular everything about (sc|sp)RNA-seq !
  • 🌱 I’m currently learning explainable AI tools for my data!
  • 💞️ I’m looking to collaborate on interesting projects! Just reach out!
  • 📫 Contact me here, or via mail. Contact details here: https://ibio.dev

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  1. FlowSets FlowSets Public

    Analyse high-dimensional data in a longitudinal fashion and find similarly regulated sets of genes

    Jupyter Notebook 1

  2. sequ-into sequ-into Public

    Forked from igemsoftware2018/igem_munich_2018

    Third generation sequencing techniques rapidly evolved as a common practice in molecular biology. Great advances have been made in terms of feasibility, cost, throughput, and read-length. However, …

    TypeScript 3 1

  3. PLOSC PLOSC Public

    Plots and Scripts for scRNA-seq analysis

    HTML

  4. bioGUI bioGUI Public

    bioGUI provides install modules for bioinformatic software for users and allows developers to script a GUI for their applications.

    C 18 3

  5. pIMZ pIMZ Public

    This framework allows to perform scRNA-seq-like analyses of imaging mass-spectrometry data. Check out the example jupyter-notebook in examples/

    Jupyter Notebook 6

  6. poreSTAT poreSTAT Public

    poreSTAT: a python framework for working with fast5 third generation sequencing data

    JavaScript