sgkit: Statistical genetics toolkit in Python

Sgkit is a Python package that provides a variety of analytical genetics methods through the use of general-purpose frameworks such as Xarray, Pandas, Dask and Zarr.

For more information on using sgkit, see the documentation.

The sgkit project uses a custom governance model and is fiscally sponsored by NumFOCUS. Consider making a tax-deductible donation to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.