Common Workflow Language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

An open source platform for managing and analyzing biomedical big data

Common Workflow Language reference implementation

Visual and code editor for Common Workflow Language

Python package to extend Airflow functionality with CWL1.1 support

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

REANA: Reusable research data analysis platform

Our VM/Docker sharing infrastructure and management component

[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

A library for generating an interactive SVG visualization of CWL workflows

The WES API is a standard way to run and manage portable workflows.

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

CWL CommandLineTool descriptions for biology/life-sciences related applications

A language server for Common Workflow Language

Typescript data model for Common Workflow Language

Create cwl workflows by writing a simple Python script

A web application to view and share Common Workflow Language workflows

[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows