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    Pascal Jouquet

    Termites, ants and earthworms are considered as soil engineers because of their effects on soil properties and their influence on the availability of resources for other organisms, including microorganisms and plants. However, the links... more
    Termites, ants and earthworms are considered as soil engineers because of their effects on soil properties and their influence on the availability of resources for other organisms, including microorganisms and plants. However, the links between their impacts on the soil environment and the resulting modification of natural selection pressures on engineer as well as on other organisms have received little attention. We suggest that the strategy evolved by species, or functional groups to control their environment can explain the difference between extended phenotype and accidental engineers. Extended phenotype engineers concentrate their activities on the building of biogenic structures in order to maintain optimal conditions for their growth. Conversely, accidental engineers expend energy in moving through the soil to be as close as possible to their optimal environment. We discuss in this paper why termites and ants are best viewed as extended phenotype engineers, and particularly how their impacts on ecosystem functioning can be considered as results of their requirements and how their activities could induce feedback loops affecting themselves. We also focus on the engineering activities of earthworms and discuss why some species can be considered as extended phenotype while others are more accidental engineers. Finally, we discuss links between the strategies developed by engineers and ecosystem functioning. Although both types of engineer create ''hot-spots'' in soil, we argue that extended phenotype engineers have a greater effect on the maintenance of ecosystem heterogeneity since they concentrate their activities at a few points, as compared to accidental engineers which may move through the soil and thus contribute to homogenisation of nutrient distribution throughout the whole ecosystem.
    Abstract The near infrared reflectance spectroscopy (NIRS) method was used in the present study to compare earthworm-made soil aggregates to aggregates found in the surrounding bulk soil. After initially assessing the daily cast... more
    Abstract The near infrared reflectance spectroscopy (NIRS) method was used in the present study to compare earthworm-made soil aggregates to aggregates found in the surrounding bulk soil. After initially assessing the daily cast production of Metaphire posthuma, boxes ...
    Compost, vermicompost and biochar amendments are thought to improve soil quality and plant yield. However, little is known about their long-term impact on crop yield and the environment in tropical agro-ecosystems. In this study we... more
    Compost, vermicompost and biochar amendments are thought to improve soil quality and plant yield. However, little is known about their long-term impact on crop yield and the environment in tropical agro-ecosystems. In this study we investigated the effect of organic amendments (buffalo manure, compost and vermicompost) and biochar (applied alone or with vermicompost) on plant yield, soil fertility, soil erosion and water dynamics in a degraded Acrisol in Vietnam. Maize growth and yield, as well as weed growth, were examined for three years in terrestrial mesocosms under natural rainfall. Maize yield and growth showed high inter-annual variability depending on the organic amendment. Vermicompost improved maize growth and yield but its effect was rather small and was only significant when water availability was limited (year 2). This suggests that vermicompost could be a promising substrate for improving the resistance of agrosystems to water stress. When the vermicompost-biochar mixt...
    While considered as sustainable and low-cost agricultural amendments, the impacts of organic fertilizers on downstream aquatic microbial communities remain poorly documented. We investigated the quantity and quality of the dissolved... more
    While considered as sustainable and low-cost agricultural amendments, the impacts of organic fertilizers on downstream aquatic microbial communities remain poorly documented. We investigated the quantity and quality of the dissolved organic matter leaching from agricultural soil amended with compost, vermicompost or biochar and assessed their effects on lake microbial communities, in terms of viral and bacterial abundances, community structure and metabolic potential. The addition of compost and vermicompost significantly increased the amount of dissolved organic carbon in the leachate compared with soil alone. Leachates from these additions, either with or without biochar, were highly bioavailable to aquatic microbial communities, although reducing the metabolic potential of the community and harbouring more specific communities. Although not affecting bacterial richness or taxonomic distributions, the specific addition of biochar affected the original lake bacterial communities, r...
    ABSTRACT Background: Exogenous organic matter may be valuable amendments for degraded tropical soil in Northern Vietnam. Their effect on carbon storage and composition need to be evaluated. Method: The study investigates soil from... more
    ABSTRACT Background: Exogenous organic matter may be valuable amendments for degraded tropical soil in Northern Vietnam. Their effect on carbon storage and composition need to be evaluated. Method: The study investigates soil from mesocosms cultivated with maize and amended with four different kinds of amendments: only mineral fertilizers (control), buffalo manure, compost or vermicompost as well as biochar. Results: All organic amendments showed a positive effect on soil carbon storage and significantly influenced soil organic matter quality. The presence of biochar increased lignin-derived compounds abundance as well as both plant and microbial sugar content of soil amended with vermicompost but had no effect in the case of control soil. Conclusion: Synergistic effects between plants and different organic amendments influence carbon storage and soil organic matter composition.
    Abstract The near infrared reflectance spectroscopy (NIRS) method was used in the present study to compare earthworm-made soil aggregates to aggregates found in the surrounding bulk soil. After initially assessing the daily cast... more
    Abstract The near infrared reflectance spectroscopy (NIRS) method was used in the present study to compare earthworm-made soil aggregates to aggregates found in the surrounding bulk soil. After initially assessing the daily cast production of Metaphire posthuma, boxes ...

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