satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
A collection of datasets of ML problem solving
Easily generate information-rich, publication-quality tables from R
Statistical Rethinking Course for Jan-Mar 2023
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
Inferring CNV from Single-Cell RNA-Seq
R toolkit for the analysis of single-cell chromatin data
Repository for Programming Assignment 2 for R Programming on Coursera
Robyn is an experimental, automated and open-sourced Marketing Mix Modeling (MMM) package from Facebook Marketing Science. It uses various machine learning techniques (Ridge regression, multi-objective evolutionary algorithm for hyperparameter optimisation, gradient-based optimisation for budget allocation etc.) to define media channel efficienc…
Fast, sensitive and accurate integration of single-cell data with Harmony
Codes for the rat manuscript mRatBN7.2
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
dplyr: A grammar of data manipulation
ADaM in R Asset Library
Bring polars to R
A package for running MR In batches and in parallel quickly
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
Accurate sample inference from amplicon data with single nucleotide resolution
Interfaces for HDF5-based Single Cell File Formats