suffixarray

java stack queue graph trie priority-queue data-structures balanced-tree heap linkedlist binarytree fenwick segmenttree suffixarray unionfind suffixtree hash-table disjoint-set segment-tree union-find

high-performance cpp14 indexing simd alignment bwt fasta blast fastq-format bioinfomatics suffixarray sequence-alignments seqan htslib sam-bam

bwt suffixarray lcp longest-common-prefix burrows-wheeler-transform lcp-array suffix-array divsufsort sais parallel-suffix-array saca

cpp14 indexing data-structures bitvector cpp17 suffixarray cpp-library compressed-suffix-trees fm-index template-library wavelet-tree lcp-array succint-data-structure cpp20

c compression optimization lz4 suffixarray

cpp suffixarray suffix-array

algorithm algorithms string suffixarray suffix-array

sort suffixarray

suffixarray longest-common-substring

suffix suffixarray suffix-array

hashing suffixarray quickselect stringbuilder unordered-map

bwt suffixarray lcp longest-common-prefix burrows-wheeler-transform lcp-array suffix-array burrows-wheeler-transformation sais

regular-expression suffixarray longest-common-prefix dc3 deterministic-finite-automaton longest-palindromic-substring

js suffixarray suffix-tree

autocomplete datastructures typeahead trie suffixarray suffixtree collating-iterator