samtools

Popular repositories

1. samtools Public

   Tools (written in C using htslib) for manipulating next-generation sequencing data

   C 1.3k 529

2. htslib Public

   C library for high-throughput sequencing data formats

   C 656 413

3. hts-specs Public

   Specifications of SAM/BAM and related high-throughput sequencing file formats

   TeX 540 172

4. bcftools Public

   This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

   C 503 222

5. htsjdk Public

   A Java API for high-throughput sequencing data (HTS) formats.

   Java 251 247

6. tabix Public archive

   Note: tabix and bgzip binaries are now part of the HTSlib project.

   C 82 40