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bioCADDIE

Popular repositories

  1. WG3-MetadataSpecifications Public

    WG3 Metadata Specification

    Python 25 13

  2. elasticsearch-queryexpansion-plugin Public

    A simple ElasticSearch plugin wrapping around the search endpoint to provide Rocchio query expansion

    Java 15 7

  3. uiuc-biocaddie-pilot Public

    BioCADDIE challenge

    Shell 8 4

  4. Foundry-ES Public

    Biocaddie Data Processing Pipeline. A data ingestion pipeline that collects and transforms original metadata information to a unified metadata model, called DatA Tag Suite (DATS).

    Java 7 3

  5. DataRank Public

    DataRank algorithm based on active learning

    MATLAB 5 1

  6. BioCaddie-core-UI Public

    The main web client and user interface for the total environment, that has access to all the services and maintains personalization with the user login functionality.

    PHP 3

Repositories

  • term-builder Public
    Python 1 2 0 1 Updated Jul 6, 2022
  • Foundry-ES Public

    Biocaddie Data Processing Pipeline. A data ingestion pipeline that collects and transforms original metadata information to a unified metadata model, called DatA Tag Suite (DATS).

    Java 7 3 0 0 Updated Feb 8, 2019
  • WG3-MetadataSpecifications Public

    WG3 Metadata Specification

    Python 25 13 11 0 Updated Nov 5, 2018
  • foundry-nlp-enhancer Public

    NLP enhancer plugin for Foundry-ES pipeline management system. The service that enhances elasticsearch functionality with NLP elements.

    Java 0 1 0 0 Updated Sep 26, 2018
  • NLP-Server Public

    NLP-Server for bioCADDIE ingestion process. The NLP processing software that enhances the current elasticsearch data after ingestion.

    Java 0 1 0 0 Updated Sep 24, 2018
  • metadata-transformations Public

    Repository for bioCADDIE metadata curation of repository configurations and metadata transformations

    1 1 0 0 Updated May 21, 2018
  • isee-delve Public

    Pilot Project 2.2 - Intelligent Search expansion and Visualization of Datasets (iSee-DELVE)

    JavaScript 2 1 0 1 Updated May 21, 2018
  • BioCaddie-core-UI Public

    The main web client and user interface for the total environment, that has access to all the services and maintains personalization with the user login functionality.

    PHP 3 0 0 1 Updated Apr 24, 2018
  • DATS Public

    Repository for dereferenceable DatA Tag Suite (DATS) JSON schemas and context files

    Python 3 0 0 0 Updated Feb 8, 2018
  • elasticsearch-queryexpansion-plugin Public

    A simple ElasticSearch plugin wrapping around the search endpoint to provide Rocchio query expansion

    Java 15 MIT 7 1 0 Updated Aug 5, 2017
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