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cobra
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Problem description
When going through an I/O cycle with a model that has subsystems stored as groups, the members of each group in the sbml file get scrambled on each cycle, as those members are stored in set() structures, which are unordered. This significantly hinders cobrapy to be used for updating a model that has groups and is stored in a Github repository, as hundreds of lines in
- The format in which metrics are exported by
grofer exportresembles thendjsonformat.- This is done for ease of appending
jsonobjects to a file without having to buffer largejsonstrings in memory. - It also makes it easier to read the file in efficient ways such as by maybe lazy loading using generators in python.
- This is done for ease of appending
- It'd be helpful to have this men
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