The Wayback Machine - https://web.archive.org/web/20220618185118/https://github.com/grunwaldlab/
Skip to content
@grunwaldlab

Grunwald lab

Popular repositories

  1. Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

    R 112 25

  2. A primer for computational tools to analyze genetics of populations in R

    HTML 64 46

  3. poppr Public

    🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

    R 55 24

  4. This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/

    HTML 15 14

  5. This site provides information on conducting reproducible science using the R language.

    HTML 12 7

  6. effectR Public

    An R package to call oomycete effectors

    R 9 7

Repositories

  • OomyceteDB Public

    A new barcode for characterizing oomycete communities.

    HTML 1 1 5 0 Updated May 24, 2022
  • metacoder Public

    Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

    R 112 25 132 0 Updated May 10, 2022
  • scylv Public

    Nextstrain analysis of Sugarcane yellow leaf virus

    Python 0 0 0 0 Updated May 5, 2022
  • rps10_barcode Public

    Analysis code for "A new oomycete metabarcoding method using the rps10 gene"

    R 0 1 0 0 Updated Apr 5, 2022
  • nextstrainoomy Public

    Documentation for the nextstrain software installed on the oomy webserver

    Python 0 GPL-3.0 0 0 0 Updated Mar 4, 2022
  • oomycetedbtools Public

    An R package for some of the code used to keep oomycetedb.org up to date.

    R 0 0 0 0 Updated Feb 9, 2022
  • Pram_pacbio_EU1_NA1 Public

    Genome data associated with an MPMI Genome Announcement for Phytophthora ramorum EU1 and NA1 genomes

    0 0 0 0 Updated Dec 15, 2021
  • idseq-workflows Public

    Portable WDL workflows for IDseq production pipelines

    Python 1 MIT 12 0 0 Updated Dec 8, 2021
  • poppr Public

    🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

    R 55 24 17 0 Updated Sep 8, 2021
  • NextstrainCommunityTest Public

    Test repo for nextstrain community github link

    0 0 0 0 Updated Aug 24, 2021

Top languages

Loading…

Most used topics

Loading…