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The Wayback Machine - https://web.archive.org/web/20220217235052/https://github.com/topics/cytof
Here are
28 public repositories
matching this topic...
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
R package for pre-processing of mass and flow cytometry data
Huge-scale, high-performance flow cytometry clustering in Julia
Updated
Feb 17, 2022
Julia
R package for interactive visualization and analysis of single-cell data
Integration of multi-batch cytometry datasets
Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.
Updated
Feb 2, 2022
Python
Analysis and visualisation single-cell proteomic data (CyTOF)
Profilling of Peripheral Blood Mononuclear Cells using CyTOF
R Script for reading CyTOF or flow cytometry data (FCS) and generating plots like Cytobank
Scripts to perform automated pipetting of (1) Barcode Production & Aliquoting and (2) a Robotic Extraction Protocol of Organoids
Updated
Nov 24, 2021
Python
Created to help backup data from a CyTOF system
Updated
Aug 27, 2019
Batchfile
Lite version of the tool to analyze and visualize CyTOF data (still under development)
Fast auto-cleanup of CyTOF data
Code for analysis of single cell signaling network kinetics from flow cytometry (CyTOF) datasets
Updated
Mar 17, 2018
Fortran
Very fast method to read number of events from some / all FCS files in a directory
Plots log histograms of FCS files like CyTOF's PlotViewer program
Shiny interface to create CyTOF .tem files
Analysis scripts for vaccination and challenge study published in Scientific Reports.
Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
R script for summarising paramater / channel intensity from flow or mass cytometry data
Opens two or more FCS files and creates new files that contain only the Channels common to all.
A handy spreadsheet for looking up elemental isotopes by symbol or mass.
A Python toolbox for quantitative, reproducible flow cytometry analysis
Updated
Mar 2, 2017
Python
Updated
Mar 21, 2019
MATLAB
CyTOF sample gating using supervised Self Organizing Maps
R Script to plot the average event rate in flow or mass cytometry (FCS) files
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