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@plotly @fslaborg @CSBiology @nfdi4plants @BioFSharp
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kMutagene/README.md

👋 Hi there! My name is Kevin, and i am a data scientist / bioinformatician / .NET/F# developer.

I am a PhD student in the lab of @muehlhaus in the department of @CSBiology at the Technical University of Kaiserslautern.

(since 2021/07/14)

Kevin's github stats Kevin's Top Langs

🔎 Academic interests

My main academic interests are:

  • meta analysis of large biological datasets and development of related methods
  • machine learning as one of the tools for above
  • metadata as an interface between wet and dry labs
  • open science

This is my ORCID record. You can also find me on researchgate

My Publication History (click to expand)
Title Journal Authors Year Repository(if applicable)
iMLP, a predictor for internal matrix targeting-like sequences in mitochondrial proteins Biological Chemistry K Schneider, D Zimmer, H Nielsen, J M Herrmann, T Mühlhaus 2021 CSBiology/iMLP
TMEA: A Thermodynamically Motivated Framework for Functional Characterization of Biological Responses to System Acclimation Entropy K Schneider, B Venn, T Mühlhaus 2020 CSBiology/TMEA
Translational Components Contribute to Acclimation Responses to High Light, Heat, and Cold in Arabidopsis iScience A Garcia-Molina, T Kleine, K Schneider, T Mühlhaus, M Lehmann, D Leister 2020
FSharpGephiStreamer: An idiomatic bridge between F# and network visualization Journal of Open Source Software K Schneider, T Mühlhaus 2019 CSBiology/FSharpGephiStreamer
Artificial intelligence understands peptide observability and assists with absolute protein quantification Frontiers in Plant Science D Zimmer, K Schneider, F Sommer, M Schroda, T Mühlhaus 2018 Source code in BioFSharp

General Programming interests

My general programming interests include:

  • data visualization 📈
  • functional programming
  • metaprogramming, project templating and scaffolding.
  • devops

I maintain several OSS repositories. Some examples:

Pinned

  1. plotly/Plotly.NET Public

    .NET interface for plotly.js written in F# 📈

    F# 286 47

  2. fslaborg/FSharp.Stats Public

    statistical testing, linear algebra, machine learning, fitting and signal processing in F#

    F# 148 39

  3. fslaborg/Deedle Public

    Easy to use .NET library for data and time series manipulation and for scientific programming

    F# 796 188

  4. CSBiology/BioFSharp Public

    Open source bioinformatics and computational biology toolbox written in F#.

    F# 94 31

  5. nfdi4plants/Swate Public

    Excel Add-In for annotation of experimental data and computational workflows.

    F# 19 5

  6. dotnet/fsharp Public

    The F# compiler, F# core library, F# language service, and F# tooling integration for Visual Studio

    F# 3.1k 688

1,451 contributions in the last year

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Contribution activity

April 2022

Created 33 commits in 4 repositories
Reviewed 4 pull requests in 3 repositories
CSBiology/BIO-BTE-12-V-4 2 pull requests
CSBiology/CSBlog 1 pull request
fslaborg/FSharp.Stats 1 pull request
Opened 1 issue in 1 repository
9 contributions in private repositories Apr 10 – Apr 19