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The Wayback Machine - https://web.archive.org/web/20210923121127/https://github.com/topics/pdb
Here are
231 public repositories
matching this topic...
.NET Decompiler with support for PDB generation, ReadyToRun, Metadata (&more) - cross-platform!
Full-screen console debugger for Python
Updated
Sep 3, 2021
Python
A tool which allows you to edit source code of any MSVC C++ project live at runtime
pdb++, a drop-in replacement for pdb (the Python debugger)
Updated
Sep 12, 2021
Python
A simple tutorial about effectively using pdb
Updated
Apr 21, 2021
Python
📖 🔬 ☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
Updated
Sep 22, 2021
Java
Neovim thin wrapper for GDB, LLDB, PDB/PDB++ and BashDB
Working with molecular structures in pandas DataFrames
Updated
Aug 30, 2021
Python
An open library for the analysis of molecular dynamics trajectories
PDBRipper is a utility for extract an information from PDB-files.
Tool for PDB generation from IDA Pro database
Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
Updated
Sep 18, 2021
Python
A tool to make Windows builds reproducible.
Remote vanilla PDB (over TCP sockets).
Updated
Oct 8, 2020
Python
Updated
Feb 19, 2017
Python
Syntax highlighting for computational biology
Updated
Jul 29, 2021
Shell
A cheatsheet for the Python Debugger (pdb)
A parser for Microsoft PDB (Program Database) debugging information
Updated
May 31, 2021
Rust
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to
📝 Adasme et al. (2021),
https://doi.org/10.1093/nar/gkab294
Updated
Aug 2, 2021
Python
A Python API for the RCSB Protein Data Bank (PDB)
Updated
Sep 5, 2021
Python
Updated
Sep 20, 2021
Python
A dependency-free cross-platform swiss army knife for PDB files.
Updated
Jul 20, 2021
Python
Protein Secondary Structure predictor using Convolutional Neural Networks
Updated
Sep 26, 2019
Python
🔧 rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) docs @
http://rna-tools.rtfd.io
Updated
Sep 21, 2021
Jupyter Notebook
Remotely and collaboratively debug your Python application via an IRC channel.
Updated
Aug 20, 2016
Python
P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.
Updated
Sep 22, 2021
Groovy
Monte Carlo and Molecular Dynamics Simulation Package
C-library for calculating Solvent Accessible Surface Areas
Utility to resolve SQL Server callstacks to their correct symbolic form using just PDBs and without a dump file
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