bioinformatics-databases

Smart search engine for all bioinformatics databases worldwide

🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).

PyPI package for traversing extremely large FTP directory trees

L1000 peak deconvolution based on Bayesian analysis

Single-Cell Immunoglobulin Repertoire Toolkit

Development base for the NEON Biorepository Data Portal at Arizona State University

A Microbial Ontology of Phenotypic and Metabolic Characters, Assays, and Culture Media Found in Prokaryotic Taxonomic Descriptions

Python package to manage protein structures and their annotations

Bacterial Surveillance platform, focused on QC in Denmark

Those are my web project building by the language of PHP,CSS and JQuery

A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.

Metadetabase of 13145 records generated for Allergens with a tabular view of the data. Web interface connected to ease the use, analysis and extraction of data with several added functionalities. Tutorial section added to educate the users of the interface design and features and the database.

stringMLST datasets

A GLUE project for Deltaretroviruses

Web application for querying data on interferon-stimulated genes (ISGs)

Extension to HCV-GLUE - contains all published HCV data from NCBI, plus analysis logic for HCV genomes.

GLUE project for Hepatitis C virus

Extension to HBV-GLUE - incorporates all sequences from GenBank.

Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).