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The Wayback Machine - https://web.archive.org/web/20210717113539/https://github.com/topics/differential-expression
#
differential-expression
Here are
99 public repositories
matching this topic...
Brings transcriptomics to the tidyverse
Differential expression analysis for single-cell RNA-seq data.
Updated
Jul 15, 2021
Python
integrated RNA-seq Analysis Pipeline
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
Explore and share your scRNAseq clustering results
Compare different differential abundance and expression methods
Porting DESeq2 and DEXSeq into python via rpy2
Updated
Mar 14, 2021
Jupyter Notebook
Interactive visualizations for differential expression
Updated
Jun 1, 2021
Python
UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
Updated
Jul 13, 2021
Nextflow
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
Interactive Differential Expression AnaLysis - DE made accessible and reproducible
Fit generalized linear models in python.
Updated
Jul 15, 2021
Python
A robust model for quantitative comparison of ChIP-Seq data sets.
Updated
May 18, 2020
Python
command line bioinformatic scripts written in R
Discrete Distributional Differential Expression
Updated
Jan 3, 2019
Python
Differential analysis of multi-omics data based on the Tweedie distribution
ASAP : Automated Single-cell Analysis Pipeline
Updated
May 15, 2020
Java
Make rapid visualizations of RNA-seq data in R
Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
Tutorial for the analysis of scRNA-seq data in R
Create a cromphensive report of DEG list coming from any analysis of RNAseq data
Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.
An R package to plot interactive three-way differential expression analysis
Automated differential expression analysis for Illumina beadarrays (HT12 V4 arrays).
Experimental design framework for scRNAseq population studies (eQTL and DE)
Code and manuscript files for Aaron's plate effect paper.
Updated
Dec 8, 2017
PostScript
Microarray Analysis Pipeline in Python
Updated
Aug 1, 2019
Jupyter Notebook
Updated
Dec 21, 2019
Jupyter Notebook
MOOMIN is a tool for analysing differential expression data
Updated
Jun 29, 2020
MATLAB
Collection of R-apps for VisR software
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