Epistasis Lab at UPenn
- Philadelphia, PA
- http://epistasis.org
- jhmoore@upenn.edu
Repositories
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srbench
A living benchmark framework for symbolic regression
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digen
Diverse and generative ML benchmarks
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tpot
A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.
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pennai
PennAI: AI-Driven Data Science
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pennai-ed-gen
Forked from RPi-Distro/pi-genFork of `pi-gen` used to build Raspberry Pi OS images for PennAI-Ed
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pmlb
PMLB: A large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms.
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ellyn
python-wrapped version of ellen, a linear genetic programming system for symbolic regression and classification.
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scikit-rebate
A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.
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bf-utils
Blackfynn Utilities
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EBIC.jl
EBIC - a biclustering algorithm in Julia
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TTox
Forked from yhao-compbio/TToxDevelop and evaluate a feature selection pipeline for the identification of toxicity targets
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PennAI-Ed
Materials for PennAI-Ed - an initiative to enhance AI and data science education built on PennAI
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Conservation-Machine-Learning
Conservation Machine Learning
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LPC
Documentation and informational resources for LPC use
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pennai-arm64-deps
Pre-compiled dependencies for building PennAI Docker images on 64-bit ARM OSs (e.g., raspberry pi)
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pennai-bioinformatics
Code to reproduce the experiments in "Evaluating recommender systems for AI-driven biomedical informatics"
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pmlbr
Forked from trang1618/pmlblitepmlb is an R interface to the Penn Machine Learning Benchmarks data repository
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pmlb-manuscript
Manuscript for PMLB v1.0
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EpistasisLab.github.io
Identifying the complex genetic architectures of disease
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3DHeatmap
3D Heatmap tool in Unity3D. Inst. for Biomed. Informatics, Univ. of PA
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SimpleModelView
A Unity package for a simplified model-view system to help with code<->UI management.
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rebate-benchmark
A centralized repository to benchmark ReBATE performance across a variety of parameter settings and datasets.
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OMNIREP
The OMNIREP algorithm: Coevolving encodings and representations
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SAFE
The SAFE Algorithm: Solution and Fitness Evolution
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scikit-mdr
A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
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mrsman
Medical Record System Management
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