BC Cancer Canada's Michael Smith Genome Sciences Centre

Pinned

1. abyss

   🔬 Assemble large genomes using short reads

   C++ 225 90

2. biobloom

   Create Bloom filters for a given reference and then use it to categorize sequences

   C++ 65 12

3. arcs

   🌈Scaffold genome sequence assemblies using linked read sequencing data

   C++ 68 13

4. ntHash

   ntHash: recursive nucleotide hashing

   C++ 61 7

5. ntCard

   Estimating k-mer coverage histogram of genomics data

   C++ 65 8

6. RNA-Bloom

   🌺 lightweight transcriptome assembly for short reads and nanopore reads

   Java 36 3