speciation

🍀 Evolutionary optimization library for Go (genetic algorithm, partical swarm optimization, differential evolution)

⚗ A package useful for chemistry written in Python

GAGA is a fast, header only, multi-objective, and distributed evolutionary algorithm library written in modern C++. It is designed to be easily usable with various genotype representations and allows the user to enable or disable several features such as novelty search or speciation. It also produces and exports various customizable statistics.

A process to better define speciation

Neural Evolution of Augmenting Topologies(NEAT) library written in javascript, heavily based on Kenneth O. Stanley's c++ library.

Some models

Individual-based and multi-scale evolutionary model, dedicated to in silico experimental evolution.

Code used to analyse WGS data of giraffe in Coimbra et al. 2021 (https://doi.org/10.1016/j.cub.2021.04.033)

Montecarlo simulation for the voter model with speciation.

Working on my deliverables et al. for the Species & Speciation module in my Honours year (run by A/Prof Muthama Muasya)

SPurS detects shifts in purifying selection

Bayesian inference on sexual selection and assortative mating between locally adapted populations

This is the repository for the project "Evaluating species origins within tropical sky-islands arthropod communities"

Model for prediction of water speciation in magmatic liquids

Protracted Birth-Death model in R