bwa

NGLess: NGS with less work

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

Docker for 4DN Hi-C processing pipeline

Detecting contamination in NGS data and multi-species analysis

Home Assistant integration - Spa Client

Whole Exome/Whole Genome Sequencing alignment pipeline

Scalable and High Performance Variant Calling on Cluster Environments

secondary analysis pipelines parallelized with apache spark

Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.

Ini adalah project Server-Side dari kelas BWA MERN 2021

Nextflow pipeline for BWA, BWA2 and STAR alignments

The DKFZ alignment workflow plugin originally developed at the eilslabs.

Ini adalah project Client-Side dari kelas BWA MERN 2021

JNI code for bwa mem

Germline Variant Calling Pipeline built in Snakemake

VAP : For Reference mapping and Variant detection.

msgen: R functions for interfacing with the Microsoft Genomics service on Azure.

Small GATK alignment and variant calling pipeline using python