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371 followers · 27 following · 49

Highlights

  • Arctic Code Vault Contributor
  • Pro

Organizations

@SciLifeLab @NationalGenomicsInfrastructure @conda-forge @bioconda @MultiQC @nf-core

Pinned

  1. MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Python 698 379

  2. nf-core/tools

    Python package with helper tools for the nf-core community.

    Python 93 55

  3. sra-explorer

    Web application to explore the Sequence Read Archive.

    HTML 97 20

  4. AWS-iGenomes

    Documentation and description of AWS iGenomes S3 resource.

    HTML 62 9

  5. ClusterFlow

    A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.

    Perl 89 24

  6. CPT-Bootstrap-Carousel

    WordPress plugin which generates a custom post type for choosing images and content. Outputs Bootstrap Image Carousel (slider) HTML from a shortcode.

    PHP 51 42

3,311 contributions in the last year

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Contribution activity

February 2021

Created 24 commits in 7 repositories
Created 1 repository

Created a pull request in nf-core/tools that received 8 comments

Lint: new files_unchanged test to check that files are not modified from the template

There are quite a lot of files in the nf-core template that should basically be left untouched. As a result we don't really check them much and whe…

+385 −461 • 8 comments
Opened 8 other pull requests in 2 repositories
Reviewed 8 pull requests in 4 repositories

Created an issue in willmcgugan/rich that received 3 comments

[BUG] no lexer for filename 'xxx' found

Describe the bug At the top of the tracebacks for my tool on exceptions I'm getting the following (see this GitHub Actions workflow): ╭────────────…

3 comments
Opened 3 other issues in 3 repositories
nf-core/nf-co.re
1 open
nf-core/ampliseq
1 closed
nextflow-io/nextflow
1 open