RivuletStudio

RivuletStudio at the University of Sydney conducting research on Biomedical Imaging Computing

Popular repositories

rivuletpy Public

Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

Python 49 15
Rivulet-Neuron-Tracing-Toolbox Public

Deprecated - Pls use the new Rivuletpy library https://github.com/RivuletStudio/rivuletpy

MATLAB 7 2
app2_py Public

python version for app2

Python 3 1
RivuletViewer Public

JS-based viewer for neuron images and swc. Extended from SharkViewer (https://github.com/JaneliaSciComp/SharkViewer)

JavaScript 1
Tuby Public

Simple tool for synthesizing 3D volumes with fibers. Useful for bench-marking neuron tracing algorithms.

Python 1 1
3D-client Public

JavaScript

rivuletpy Public
Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

Python 49 BSD-3-Clause 15 6 0 Updated Dec 29, 2020
Tuby Public
Simple tool for synthesizing 3D volumes with fibers. Useful for bench-marking neuron tracing algorithms.

Python 1 1 0 0 Updated Feb 15, 2018
Rivulet-Neuron-Tracing-Toolbox Public
Deprecated - Pls use the new Rivuletpy library https://github.com/RivuletStudio/rivuletpy

MATLAB 7 Apache-2.0 2 1 0 Updated Oct 23, 2017
app2_py Public
python version for app2

Python 3 1 0 0 Updated Jun 6, 2017
vaa3d_tools Public
A fork of the tools of www.vaa3d.org - vaa3d_tools. Used for algorithm porting in RivuletStudio@Uni.Sydney

C++ 0 66 1 0 Updated Dec 5, 2016
3D-client Public

JavaScript 0 0 0 0 Updated Dec 2, 2016
RivuletViewer Public
JS-based viewer for neuron images and swc. Extended from SharkViewer (https://github.com/JaneliaSciComp/SharkViewer)

JavaScript 1 0 0 0 Updated Mar 26, 2016

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