bioCADDIE

Repositories

• term-builder
  Python 1 1 0 0 Updated Jul 18, 2020

• Foundry-ES

  Biocaddie Data Processing Pipeline. A data ingestion pipeline that collects and transforms original metadata information to a unified metadata model, called DatA Tag Suite (DATS).

  java mongodb pipeline activemq ingestion dats
  Java 2 6 0 0 Updated Feb 8, 2019

• WG3-MetadataSpecifications

  WG3 Metadata Specification

  schema-org json-ld data-discovery json-schemas data-modeling dats-model
  Python 12 24 11 0 Updated Nov 5, 2018

• foundry-nlp-enhancer

  NLP enhancer plugin for Foundry-ES pipeline management system. The service that enhances elasticsearch functionality with NLP elements.

  ingestion nlp-enhancer
  Java 1 0 0 0 Updated Sep 26, 2018

• NLP-Server

  NLP-Server for bioCADDIE ingestion process. The NLP processing software that enhances the current elasticsearch data after ingestion.
  Java 1 0 0 0 Updated Sep 24, 2018

• metadata-transformations

  Repository for bioCADDIE metadata curation of repository configurations and metadata transformations
  1 1 0 0 Updated May 21, 2018

• isee-delve

  Pilot Project 2.2 - Intelligent Search expansion and Visualization of Datasets (iSee-DELVE)
  JavaScript 1 2 0 1 Updated May 21, 2018

• BioCaddie-core-UI

  The main web client and user interface for the total environment, that has access to all the services and maintains personalization with the user login functionality.

  javascript mysql php
  PHP 0 3 0 1 Updated Apr 24, 2018

• DATS

  Repository for dereferenceable DatA Tag Suite (DATS) JSON schemas and context files
  Python 0 3 0 0 Updated Feb 8, 2018

• elasticsearch-queryexpansion-plugin

  A simple ElasticSearch plugin wrapping around the search endpoint to provide Rocchio query expansion
  Java MIT 7 12 1 0 Updated Aug 5, 2017

• biocaddie-priors

  Enables ElasticSearch scoring with two types of document priors.
  Java MIT 1 0 0 0 Updated Aug 2, 2017

• uiuc-biocaddie-pilot

  BioCADDIE challenge
  Shell MIT 4 7 0 1 Updated Aug 1, 2017

• prototype_issues

  Used to report and track bioCADDIE prototype issues
  2 3 210 (5 issues need help) 0 Updated Jan 17, 2017

• DataRank

  DataRank algorithm based on active learning
  MATLAB 1 4 0 0 Updated Sep 17, 2015

• Pilot-Project
  PHP 0 1 0 0 Updated Sep 17, 2015

• ES-Index

  Repository for collecting issues on the DDI ElasticSearch Index.
  0 1 5 (1 issue needs help) 0 Updated Sep 3, 2015