A versatile sequenced read processor for nanopore direct RNA sequencing
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May 24, 2020 - Python
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barcoding
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This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MACSE. These pipelines are mostly bash scripts encapsulated within singularity containers and sometimes combined in nextflow workflows.
nextflow
bioinformatics-pipeline
sequence-alignments
singularity-container
sequence-alignment
barcoding
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Aug 31, 2021 - Shell
This repository contains the scripts used to retrieve and analyze the data reported in Porter & Hajibabaei 2018 bioRxiv doi: https://doi.org/10.1101/353904
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Feb 9, 2021 - Perl
Code repository for macsGESTALT single cell lineage tracing analysis https://doi.org/10.1101/2020.08.11.245787
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May 10, 2021 - HTML
Wrapper for BOLD API (+ barcode auditing)Variability measures of DNA barcodes sequences (i.e. Intraspecific and Interespecific)
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Sep 17, 2018 - R
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