The Wayback Machine - https://web.archive.org/web/20220320132637/https://github.com/topics/image-analysis-workflows

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image-analysis-workflows

Here are 14 public repositories matching this topic...

Cardiac-MR-Group-Lund / segment-open

Segment Source Distribution

plugin matlab plugins image-processing medical medical-imaging segmentation image-analysis matlab-interface plugin-system magnetic-resonance-imaging image-analysis-workflows medical-image-processing cardiac computed-tomography matlab-gui cardiac-dynamics cardiac-segmentation image-analysis-and-processing computedtomography

Updated Sep 15, 2021
MATLAB

tlnagy / OMETIFF.jl

I/O operations for OME-TIFF files in Julia

julia julia-language image-processing image-analysis ome-tiff ome-files image-analysis-workflows micromanager

Updated Jan 27, 2022
Julia

imagej_macros_and_scripts

MontpellierRessourcesImagerie / imagej_macros_and_scripts

ImageJ macros and scripts written at the imaging facility MRI

imagej fiji imagej-plugins jython image-analysis-workflows imagej-macro bioimage-analysis fiji-macro toolsets imagej-macros imagej-macro-scripts

Updated Mar 18, 2022
ImageJ Macro

ciccalab / SIMPLI

SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.

life-sciences-image gating mcd ome-tiff imc histology image-analysis-workflows tissue-classification cell-segmentation bioimage-informatics bioimaging single-cell-analysis bioimage-analysis histological-images immunofluorescence bioimage-tools imaging-mass-cytometry tissue-analysis

Updated Feb 10, 2022
R

crud89 / Texturize

A unified framework for example-based texture synthesis, developed alongside my master's thesis.

computer-vision computer-graphics image-processing synthetic-images image-analysis textures texture-synthesis image-analysis-workflows texture-generation texture-mapping procedural-textures image-analysis-and-processing texture-analysis

Updated Mar 25, 2019
C++

waliens / sldc

An open-source Python framework created for accelerating development of large image analysis workflows

image-analysis-workflows

Updated Feb 4, 2022
Python

Quantitative-Big-Imaging / Quantitative-Big-Imaging-2017

The material for the Quantitative Big Imaging Course at ETHZ for Spring Semester 2017

big-data knime image-processing educational image-analysis image-analysis-workflows lecture-slides

Updated Jul 5, 2017
HTML

PathologyDataScience / MatDigitalPathology

Matlab functions to support analysis of digital pathology images.

cancer matlab image-processing image-analysis microscopy image-analysis-workflows digital-pathology

Updated Feb 21, 2017
MATLAB

ggirelli / pygpseq

Python3 package to analyse GPSeq images and manage TIFF files.

image tiff image-processing cell nuclei image-analysis 3d tiff-files tiff-format image-analysis-workflows gpseq fish-signals

Updated Oct 18, 2021
Python

AriChow / image_analysis_toolbox

Toolbox for image analysis pipeline (image pre-processing, feature extraction, feature preprocessing, dimensionality reduction, classification, clustering and regression). Powered by sklearn and other python libraries.

machine-learning image computer-vision image-analysis-workflows image-analysis-toolbox

Updated Dec 22, 2017
Python

jonasoh / AuTToFlux

Pipeline for high-throughput analysis of RFP/GFP ratios in vacuoles

science r imagej biology image-analysis-workflows autophagy

Updated Jan 7, 2020
R

rjrahul24 / cnn-logistic-image-analysis

We build upon Logistic Regression concepts and create a Deep Learning Convolution Neural Network. This repository explains how Logistic Regression is really the root of building Multilayer Perceptron models for Machine Learning and Deep Learning.

deep-learning image-processing pytorch logistic-regression image-analysis-workflows pytorch-tutorial

Updated Jun 10, 2021
Jupyter Notebook

kmader / conduit_analysis

image-processing image-analysis image-analysis-workflows image-analysis-and-processing binder-ready

Updated Apr 11, 2018
Jupyter Notebook

ogemarques / python-matlab

Example of how to integrate MATLAB apps into a Python deep learning workflow for computer vision and image analysis tasks.

python computer-vision deep-learning image-annotation matlab image-processing segmentation image-segmentation image-analysis image-analysis-workflows image-annotation-tool image-segmentation-pipeline

Updated Dec 6, 2021

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