We are building an open database of COVID-19 cases with chest X-ray or CT images.
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Jun 30, 2020 - Jupyter Notebook
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computed-tomography
Here are 54 public repositories matching this topic...
COVID-CT-Dataset: A CT Scan Dataset about COVID-19
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Jul 1, 2020 - Jupyter Notebook
RadIO is a library for data science research of computed tomography imaging
data-science
machine-learning
deep-learning
tensorflow
medical-imaging
neural-networks
computed-tomography
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May 24, 2019 - Jupyter Notebook
deep-learning
segmentation
convolutional-neural-networks
semantic-segmentation
fully-convolutional-networks
computed-tomography
multi-organ-segmentation
computer-aided-detection
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Feb 11, 2019 - Jupyter Notebook
xinario
commented
Jan 22, 2019
- Which are the 850 images mentioned in your paper?
Inside each experiment folder (SE0, SE1....SE28), there are 906 images. So to get the exact 850 images, you need to, first, reordering the image sequence according to the [SliceLocation] field of the Dicom image (sort in ascending order) and you will get images arranged from pelvis to head. Then just keeping slice 21 to 870 and discard the rest
Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing
machine-learning
image
image-reconstruction
matlab
image-classification
phantom
tomography
reconstruction
radon
denoising-images
computed-tomography
deblurring
3d-phantoms
astra-toolbox
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Jun 29, 2020 - C
Learned Primal-Dual Reconstruction
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Jun 23, 2019 - Python
Low-dose CT via Transfer Learning from a 2D Trained Network, In IEEE TMI 2018
deep-learning
generative-adversarial-network
transfer-learning
perceptual-losses
computed-tomography
denoising
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Feb 17, 2019 - Python
Segment Source Distribution
plugin
matlab
plugins
image-processing
medical
medical-imaging
segmentation
image-analysis
matlab-interface
plugin-system
magnetic-resonance-imaging
image-analysis-workflows
medical-image-processing
cardiac
computed-tomography
matlab-gui
cardiac-dynamics
cardiac-segmentation
image-analysis-and-processing
computedtomography
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Jun 16, 2020 - MATLAB
General deep learning-based fast image registration framework for clinical thoracic 4D CT data
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Dec 13, 2018 - Python
CT image reconstruction using Fan-beam Filtered back-projection with Parker and Differential weighting.
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Jul 31, 2019 - MATLAB
Computed Tomography Image Reconstruction Project using MATLAB
image-reconstruction
matlab
image-processing
medical-imaging
medical-image-processing
computed-tomography
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Sep 6, 2019 - MATLAB
A module for the Insight Toolkit (ITK) that provides a generic, modular, and extensible architecture for lesion sizing algorithms in medical images as well as a reference algorithm for lung solid lesion segmentation in CT images.
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May 6, 2020 - C++
C++ implementation of oral cancer detection on CT images
neural-network
image-processing
feature-engineering
classification-algorithm
computed-tomography
cancer-detection
computer-aided-detection
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Mar 25, 2019 - C++
This repository applies the affine and deformation transformation on the CT scan in the subject space, and register it to the MNI 1mm space
affine-transformation
magnetic-resonance-imaging
computed-tomography
medical-image-registration
deformation-transformation
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Dec 13, 2019 - Python
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
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Jun 11, 2020 - Python
Deep Negative Volume Segmentation
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Jun 24, 2020 - Python
This repository contains Matlab scripts and functions for spectral CT material decomposition
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Sep 27, 2018 - MATLAB
Content-oriented Sparse Representation (COSR) Denoising in CT Images with the Ability of Texture and Edge Preserving
sparse-coding
dictionary-learning
denoising-images
cbct
computed-tomography
denoising
sparse-representations
cone-beam-ct
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Oct 2, 2018 - C++
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Jun 26, 2019 - MATLAB
Matlab toolbox for polyenergetic quantitative (polyquant) X-ray CT reconstruction with demos.
image-processing
medical-imaging
statistical-inference
quantitative-imaging
reconstruction-toolbox
medical-image-computing
matlab-toolbox
cbct
computed-tomography
medical-physics
scatter
poisson-reconstruction
cone-beam-ct
ct-reconstruction
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Jun 3, 2019 - MATLAB
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Jun 26, 2020 - C++
Python bindings for Computed Tomography Library (CTL)
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Jul 1, 2020 - C++
Parallel-beam CT (C/C++ ver.)
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Jan 13, 2020 - C
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Apr 5, 2020 - MATLAB
R package for programmatic analysis of sediment cores scanned using computed tomography imaging
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Nov 27, 2019 - R
A set of tools to analyze the curvature of colon segmentations.
python
skeleton
curve
segmentation
curvature
computed-tomography
patients
colon
3dslicer
colon-segmentations
supine
fiducial-markups
cut-points
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Jan 4, 2020 - Python
Parallel-beam CT (MATLAB ver.)
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Jan 12, 2020 - MATLAB
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during CI on my hiwenet, I discovered a ton of deprecation warnings from scipy : https://travis-ci.org/github/raamana/hiwenet/jobs/658810855
mostly asking medpy to move from scipy to numpy for functions such as sum, absolute, sqrt, square etc .. see below for a sample, and the above link for a full list.. If you can, can you try fix them? thanks.