Repository for the CWL standards. Use https://www.biostars.org/t/cwl/ for support 😊
Common Workflow Language
CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.
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- Created by Peter Amstutz, John Chilton, Michael R. Crusoe, Nebojša Tijanić, and the CWL Community
- Released January 2015
Repositories 25
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
Python
Updated Mar 22, 2019
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to m…
workflow-execution
workflow
cloud
hpc
bioinformatics
executor
scala
docker
ga4gh
containers
wdl
workflow-description-language
cwl
common-workflow-language
application
Scala
Updated Mar 22, 2019
Common Workflow Language reference implementation
Visual and code editor for Common Workflow Language
Reproducible Analyses for Bioinformatics - Java
Common Workflow Language
Updated Jan 31, 2019
SevenBridges Python Api bindings
Python
Updated Mar 5, 2019
Typescript data model for Common Workflow Language
A web application to view and share Common Workflow Language workflows
Java
Updated Jan 26, 2019
Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R
R
Updated Mar 21, 2019
CWL (and input file) parser for Golang, used by github.com/otiai10/yacle
Go
Updated Mar 19, 2019
Yet Another CWL Engine by Golang
Go
Updated Mar 19, 2019
Framework for testing CWL tools and workflows
Python
Updated Mar 1, 2019
The CWL v1.0 user guide
HTML
Updated Mar 14, 2019
This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annota…
cwl-workflow
common-workflow-language
cwl
workflow
cwl-descriptions
transdecoder
diamond
phmmer
cwl-description
HTML
Updated Mar 19, 2019
Tutorial for the Common Workflow Language using SnpEff
Common Workflow Language
Updated Nov 13, 2018
This tool provides a handy way to inspect properties of tools or workflows written in Common Workflow Language
Ruby
Updated Mar 18, 2019
Seven Bridges Python library for programatic generation of CWL workflows.
Python
Updated Nov 23, 2018
CWL mode for Emacs
Emacs Lisp
Updated Jan 24, 2018
[Pre-alpha] Workflow helper for Common Workflow Language
Python
Updated Mar 19, 2019
Summarize the result of conformance test using cwltest
Ruby
Updated Jul 18, 2018
Common Workflow Language
Updated Mar 5, 2019
Add on-the-fly checker for Common Workflow Language
Emacs Lisp
Updated Dec 26, 2017
A Language Server for CWL
Python
Updated Jan 16, 2019
Generates CWL files that do nothing.
Python
Updated Sep 7, 2018
Learn about cwl
- Organization
- common-workflow-language
- Website
- www.commonwl.org
- Wikipedia
- Wikipedia