Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.
Python
Updated Mar 17, 2019
FMA: A Dataset For Music Analysis
Jupyter Notebook
Updated Jan 19, 2019
A DSL for data-driven computational pipelines
An R-focused pipeline toolkit for reproducibility and high-performance computing
R
Updated Mar 29, 2019
☁️ 🚀 📊 📈 Evaluating state of the art in AI
LabNotebook is a tool that allows you to flexibly monitor, record, save, and query all your machine learning experime…
Jupyter Notebook
Updated Mar 31, 2018
Collection of popular and reproducible image denoising works.
Updated Jan 23, 2019
Insight Toolkit (ITK) -- Official Repository
A research tool for the Iterated Prisoner's Dilemma
Python
Updated Mar 19, 2019
Effortless method to record provenance in Python
Python
Updated Dec 3, 2018
rrtools: Tools for Writing Reproducible Research in R
R
Updated Feb 8, 2019
Collective Knowledge framework helps to convert ad-hoc code, data and scripts into portable, customizable and reusabl…
Pweave is a scientific report generator and a literate programming tool for Python. It can capture the results and pl…
Python
Updated Mar 3, 2019
Scientific reports/literate programming for Julia
Julia
Updated Mar 12, 2019
papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manscr…
Functional workflows
An R Pandoc Writer
GLSL
Updated Mar 29, 2019
An R package to create styled tables in multiple output formats, with a friendly, modern interface.
Future Gadget Laboratory
HTML
Updated Mar 3, 2018
ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a f…
Package an R workspace and all dependencies as a Docker container
Interactive Jupyter widgets to visualize images in 2D and 3D
Containerize R Markdown documents for continuous reproducibility
R
Updated Mar 18, 2019
Generate custom Docker and Singularity images, and minimize existing containers
Everware is about re-useable science, it allows people to jump right in to your research code.
Python
Updated Jun 23, 2018
project page for creating a guide to reproducible research
HTML
Updated Jul 2, 2018
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
Nextflow
Updated Mar 29, 2019
Lightweight, Python library for fast and reproducible experimentation 🔬
Python
Updated Nov 23, 2018
R package to interface with OpenML
Jupyter Notebook
Updated Mar 16, 2019
