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Integrated Graph Cuts for Brain MRI Segmentation

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Medical Image Computing and Computer-Assisted Intervention – MICCAI 2006 (MICCAI 2006)
Integrated Graph Cuts for Brain MRI Segmentation
  • Zhuang Song19,
  • Nicholas Tustison19,
  • Brian Avants19 &
  • …
  • James C. Gee19 

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 4191))

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  • International Conference on Medical Image Computing and Computer-Assisted Intervention
  • 3334 Accesses

  • 53 Citations

Abstract

Brain MRI segmentation remains a challenging problem in spite of numerous existing techniques. To overcome the inherent difficulties associated with this segmentation problem, we present a new method of information integration in a graph based framework. In addition to image intensity, tissue priors and local boundary information are integrated into the edge weight metrics in the graph. Furthermore, inhomogeneity correction is incorporated by adaptively adjusting the edge weights according to the intermediate inhomogeneity estimation. In the validation experiments of simulated brain MRIs, the proposed method outperformed a segmentation method based on iterated conditional modes (ICM), which is a commonly used optimization method in medical image segmentation. In the experiments of real neonatal brain MRIs, the results of the proposed method have good overlap with the manual segmentations by human experts.

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Author information

Authors and Affiliations

  1. Penn Image Computing and Science Lab, University of Pennsylvania, USA

    Zhuang Song, Nicholas Tustison, Brian Avants & James C. Gee

Authors
  1. Zhuang Song
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  2. Nicholas Tustison
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  3. Brian Avants
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  4. James C. Gee
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Editor information

Editors and Affiliations

  1. Department of Informatics and Mathematical Modelling, Technical University of Denmark, Denmark

    Rasmus Larsen

  2. Nordic Bioscience, Herlev, Denmark

    Mads Nielsen

  3. Department of Computer Science, University of Copenhagen, Denmark

    Jon Sporring

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© 2006 Springer-Verlag Berlin Heidelberg

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Song, Z., Tustison, N., Avants, B., Gee, J.C. (2006). Integrated Graph Cuts for Brain MRI Segmentation. In: Larsen, R., Nielsen, M., Sporring, J. (eds) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2006. MICCAI 2006. Lecture Notes in Computer Science, vol 4191. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11866763_102

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  • DOI: https://doi.org/10.1007/11866763_102

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-44727-6

  • Online ISBN: 978-3-540-44728-3

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Keywords

  • Image Segmentation
  • Edge Weight
  • Markov Random Field
  • Manual Segmentation
  • Medical Image Segmentation

These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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