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Predictability of Rules in HIV-1 Protease Cleavage Site Analysis

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Computational Science – ICCS 2006 (ICCS 2006)
Predictability of Rules in HIV-1 Protease Cleavage Site Analysis
  • Hyeoncheol Kim20,
  • Tae-Sun Yoon20,
  • Yiying Zhang21,
  • Anupam Dikshit21 &
  • …
  • Su-Shing Chen21 

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3992))

Included in the following conference series:

  • International Conference on Computational Science
  • 1718 Accesses

  • 2 Citations

Abstract

Symbolic rules play an important role in HIV-1 protease cleavage site prediction. Recently, some studies have done on extraction of the prediction rules with some success. In this paper, we demonstrated a decompositional approach for rule extraction from nonlinear neural networks. We also compared the prediction rules to the ones extracted by other approaches and methods. Empirical experiments are also shown.

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Author information

Authors and Affiliations

  1. Dept. of Computer Science Education, Korea University, Seoul, 136-701, Korea

    Hyeoncheol Kim & Tae-Sun Yoon

  2. Computer & Info. Sciences and Engineering, University of Florida, Gainesville, FL., 32611, U.S.A.

    Yiying Zhang, Anupam Dikshit & Su-Shing Chen

Authors
  1. Hyeoncheol Kim
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  2. Tae-Sun Yoon
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  3. Yiying Zhang
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  4. Anupam Dikshit
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  5. Su-Shing Chen
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Editor information

Editors and Affiliations

  1. Advanced Computing and Emerging Technologies Centre, The School of Systems Engineering, University of Reading, RG6 6AY, Reading, United Kingdom

    Vassil N. Alexandrov

  2. Department of Mathematics and Computer Science, University of Amsterdam, Kruislaan 403, 1098, SJ Amsterdam, The Netherlands

    Geert Dick van Albada

  3. Faculty of Sciences, Section of Computational Science, University of Amsterdam, Kruislaan 403, 1098, SJ Amsterdam, The Netherlands

    Peter M. A. Sloot

  4. Computer Science Department, University of Tennessee, TN 37996-3450, Knoxville, USA

    Jack Dongarra

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© 2006 Springer-Verlag Berlin Heidelberg

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Kim, H., Yoon, TS., Zhang, Y., Dikshit, A., Chen, SS. (2006). Predictability of Rules in HIV-1 Protease Cleavage Site Analysis. In: Alexandrov, V.N., van Albada, G.D., Sloot, P.M.A., Dongarra, J. (eds) Computational Science – ICCS 2006. ICCS 2006. Lecture Notes in Computer Science, vol 3992. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11758525_111

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  • DOI: https://doi.org/10.1007/11758525_111

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-34381-3

  • Online ISBN: 978-3-540-34382-0

  • eBook Packages: Computer ScienceComputer Science (R0)Springer Nature Proceedings Computer Science

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Keywords

  • Prediction Rule
  • Association Rule Mining
  • Decompositional Approach
  • Rule Extraction
  • Trained Neural Network

These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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