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  • Thank you! It's not quite sufficient because this command seems to remove with the wildcards. For example, adding 'echo "$fw1" ' afterwards as a test gives out stuff like '/scratch/[username]/data/*626-*_1_bbduk.fq', as opposed to, for example, '/scratch/[username]/data/File0626-sequence_1_bbduk.fq'. The wildcards are slightly different for different files so I can't easily account for them. Commented Mar 21, 2022 at 15:39