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  • How are you switching between the different OS's? Are you using suspend-to-disk (hibernate) or are you rebooting? Commented Jan 4, 2013 at 18:13
  • Just rebooting. My battery is almost dead, so I use it plugged in. That's why I don't make my computer sleep or hibernate. Commented Jan 4, 2013 at 18:16
  • That setup should work and I would recommend it. There's something pathological about your NTFS partition. If possible, you could try and reformat that partition (after having moved/copied all the data elsewhere): mkfs.ntfs /dev/sda3 and see if it still does it. Commented Jan 4, 2013 at 23:07