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2Not an answer, but a suggestion: this format is hard to read. I bet that we could give you much better answers if you asked on our sister site, Bioinformatics but ask about your actual input data, before you format it in this way. Presumably, you have a protein fasta file at some point and it would almost certainly be much simpler to find the pattern there.terdon– terdon ♦2019-09-19 15:07:40 +00:00Commented Sep 19, 2019 at 15:07
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@terdon Thanks for the advise. You're right it is protein, but extracted from structural pdb file.Sion du bois– Sion du bois2019-09-20 07:19:12 +00:00Commented Sep 20, 2019 at 7:19
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