Since there is no built-in name spacing of modules (or components of modules) the best way to achieve your goal is to use a unique naming convention for your modules. Most libraries for angular do this, and then you should be good to go.
Besides encapsulating your applications behavior, modules help testing and mocking your application.
I dont think it is possible for angular to differentiate between two components that are named the same (I think this changes with angular 2). And I might argue that two components that are named the same might do the same and you should look why you need both?