Phylogenetics

Latest research

1. Integrative taxonomy elucidates phylogenetic position of a clawless African eutardigrade (Tardigrada) supporting the erection of a new genus

   • Jędrzej Warguła
   • Wiktoria Dmuchowska
   • Łukasz Kaczmarek

   in Scientific Reports

   Article Open access 03 October 2025

   

2. Orthology and near-cographs in the context of phylogenetic networks

   • Anna Lindeberg
   • Guillaume E. Scholz
   • Marc Hellmuth

   in Algorithms for Molecular Biology

   Article Open access 02 October 2025

   

3. Characterization of the five Amanita complete mitochondrial genome and the phylogenetic relationship with other Amanita fungi

   • Xianyi Wang
   • Guangyin Xu
   • Yuanming Wu

   in BMC Genomics

   Article Open access 29 September 2025

   

4. Representing distance-hereditary graphs with multi-rooted trees

   • Guillaume E. Scholz

   in Graphs and Combinatorics

   Article Open access 27 September 2025

   

5. Lower Bounds on the Sample Complexity of Species Tree Estimation when Substitution Rates Vary Across Loci

   • Max Hill
   • Sebastien Roch

   in Bulletin of Mathematical Biology

   Article 27 September 2025

   

6. Natural Product Diversity of Australian Rainforests

   • A. Douglas Kinghorn
   • Heinz Falk
   • Verena M. Dirsch

   in Progress in the Chemistry of Organic Natural Products

   Book 2025

   

7. Orogeny shapes the diversification of an ancient and relict spider family (Hypochilidae), with the stepwise uplift of the Qinghai-Tibetan plateau driving the radiation of Asian lineages

   • Jiang-Ni Li
   • Li-Li Shao
   • Hui-Feng Zhao

   in BMC Genomics

   Article Open access 26 September 2025

   

8. First complete plastomes of the emblematic Andean tree genus Polylepis Ruiz & Pav. (Rosaceae)

   • Jay Edneil C. Olivar
   • Jana Ebersbach
   • Marcus Lehnert

   in Scientific Reports

   Article Open access 23 September 2025

   

9. Metagenomic analysis of viral diversity in Portuguese bats

   • Mahima Hemnani
   • Mustafa Karatas
   • João R Mesquita

   in Veterinary Research Communications

   Article Open access 20 September 2025

   

10. Prioritizing tree species conservation in a megadiverse South American region: integrating taxonomic and phylogenetic metrics

    • Ivan Justino de Farias
    • Vanessa Pontara
    • Marcelo Leandro Bueno

    in Biodiversity and Conservation

    Article 19 September 2025

    

11. Network Representation and Modular Decomposition of Combinatorial Structures: A Galled-Tree Perspective

    • Anna Lindeberg
    • Guillaume E. Scholz
    • Marc Hellmuth

    in Vietnam Journal of Mathematics

    Article Open access 16 September 2025

    

12. The first complete mitogenome of the bumblebee catfish, Pseudomystus siamensis (Regan, 1913), resolves its phylogenetic position and provides molecular evidence for the monophyly of the genus

    • Hoang Danh Nguyen
    • Hoang Dang Khoa Do
    • Minh Thiet Vu

    in Molecular Biology Reports

    Article 12 September 2025

    

13. Hidden diversity and host specificity of bat trypanosomes in East and Central Africa

    • Sadic Waswa Babyesiza
    • Alena Fornůsková
    • Jan Votýpka

    in Parasitology Research

    Article Open access 11 September 2025

    

14. Decoding Tupiperla illiesi Froehlich 1998 (Plecoptera: Gripopterygidae): Insights into Morphological Variation and Molecular Species Delimitation

    • Felipe Ribeiro Pereira Sarmento
    • Tácio Duarte
    • Frederico Falcão Salles

    in Neotropical Entomology

    Article 10 September 2025

    

15. The first complete mitochondrial genome of Spinturnix psi (Dermanyssoidea, Spinturnicidae): gene content, composition, rearrangement and phylogenetic implications

    • Jinting Yang
    • Huijuan Yang
    • Xiaobin Huang

    in Experimental and Applied Acarology

    Article 10 September 2025

    

16. Phylogenomics and age estimation for Sri Lankan Piper (Piperaceae) species using genotyping-by-sequencing

    • Bhathiya Gopallawa
    • Dominik Metschina
    • Deepthi Yakandawala

    in Plant Systematics and Evolution

    Article 08 September 2025

    

17. Phylogeny and morphology of some Palearctic echinostomatid digeneans from rallid bird Fulica atra Linnaeus, 1758

    • Sergei A. Vlasenkov
    • Mikhail Yu. Shchelkanov
    • Sergey G. Sokolov

    in Biologia

    Article 08 September 2025

    

18. Complete mitochondrial genome of Labeo fimbriatus (fringe-lipped carp) and insights into its evolutionary relationships within the genus Labeo

    • Annam Pavan-Kumar
    • V. Subashini
    • Aparna Chaudhari

    in Molecular Biology Reports

    Article 08 September 2025

    

19. Charting taxa in Amanita section Amidella (Basidiomycota: Amanitaceae)

    • Paulo Oliveira
    • Ricardo Arraiano-Castilho

    in Mycological Progress

    Article Open access 06 September 2025

    

20. The GFB Tree and Tree Imbalance Indices

    • Sean Cleary
    • Mareike Fischer
    • Katherine St. John

    in Bulletin of Mathematical Biology

    Article Open access 05 September 2025

    

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